Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Signal recognition particle, SRP54 subunit, GTPase

Term: IPR000897  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene129703 SustainPine v3.0 503
AutoFact: initiator tRNA phosphoribosyl transferase-like protein [Arabidopsis thaliana] gb|AAP37680.1| At2g40570 [Arabidopsis thaliana] dbj|BAE99980.1| putative initiator tRNA phosphoribosyl-transferase [Arabidopsis thaliana] gb|AEC09849.1| initiator tRNA phosphori 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative initiator tRNA phosphoribosyl-transferase 2.194e-09
N-terminus
sp_v3.0_unigene130709 SustainPine v3.0 270
AutoFact: HEAT repeat, putative n=1 Tax=Oryza sativa Japonica Group RepID=Q53RB7_ORYSJ 1.0e-35
FL-Next: tr=HEAT repeat family protein, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Importin beta-3, putative 9.178e-09
Internal
sp_v3.0_unigene131246 SustainPine v3.0 553
AutoFact: putative flavonol synthase [Arabidopsis thaliana] 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fe2+ dioxygenase-like 2.156e-12
Internal
sp_v3.0_unigene137190 SustainPine v3.0 331
AutoFact: putative valyl-tRNA synthetase [Oryza sativa Japonica Group] 8.0e-36
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene140020 SustainPine v3.0 373
AutoFact: Ethylene response factor 2.2 n=1 Tax=Bupleurum kaoi RepID=E8ZB56_9APIA 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene140557 SustainPine v3.0 510
AutoFact: putative signal recognition particle receptor [Oryza sativa Japonica Group] dbj|BAD10269.1| putative signal recognition particle receptor [Oryza sativa Japonica Group] 8.0e-13
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
C-terminus
sp_v3.0_unigene142567 SustainPine v3.0 362
AutoFact: Ethylene-responsive transcription factor 4 n=4 Tax=Nicotiana RepID=ERF4_NICSY 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 2.285e-28
Putative N-terminus
sp_v3.0_unigene142642 SustainPine v3.0 555
AutoFact: subtilisin-type protease precursor [Glycine max] 7.0e-34
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Subtilisin-like protein 8.948e-08
Internal
sp_v3.0_unigene142666 SustainPine v3.0 746
AutoFact: YGGT family protein [Arabidopsis thaliana] emb|CAB36768.1| putative protein [Arabidopsis thaliana] emb|CAB79601.1| putative protein [Arabidopsis thaliana] dbj|BAE98662.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85417.1| YGGT family protein [Arab 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene144445 SustainPine v3.0 472
AutoFact: YGGT family protein [Arabidopsis thaliana] emb|CAB36768.1| putative protein [Arabidopsis thaliana] emb|CAB79601.1| putative protein [Arabidopsis thaliana] dbj|BAE98662.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85417.1| YGGT family protein [Arab 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene148283 SustainPine v3.0 311
AutoFact: phosphatidylinositol 3- and 4-kinase-like protein [Arabidopsis thaliana] gb|AAL31202.1| At1g13640/F21F23_7 [Arabidopsis thaliana] gb|AAN31098.1| At1g13640/F21F23_7 [Arabidopsis thaliana] gb|AEE29053.1| phosphatidylinositol 3- and 4-kinase-like protein [Ar 6.0e-35
FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene150016 SustainPine v3.0 273
AutoFact: Inositol or phosphatidylinositol kinase, putative n=1 Tax=Ricinus communis RepID=B9RLG3_RICCO 1.0e-36
FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Phosphatidylinositol 3-and 4-kinase family protein 3.314e-08
Internal
sp_v3.0_unigene150508 SustainPine v3.0 393
AutoFact: 40S ribosomal protein S25 n=1 Tax=Branchiostoma belcheri RepID=RS25_BRABE 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 4.456e-16
Complete
sp_v3.0_unigene150559 SustainPine v3.0 346
AutoFact: signal recognition particle receptor alpha subunit, [Plasmodium chabaudi chabaudi] emb|CAH76902.1| signal recognition particle receptor alpha subunit, putative [Plasmodium chabaudi chabaudi] 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene151435 SustainPine v3.0 239
AutoFact: 40S ribosomal protein S25 (Fragment) n=2 Tax=core eudicotyledons RepID=Q6VEV1_SOYBN 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 5.899e-16
C-terminus
sp_v3.0_unigene151694 SustainPine v3.0 420
AutoFact: Ribosomal protein S25, putative n=2 Tax=Aedes aegypti RepID=Q16SG6_AEDAE 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 4.696e-16
Putative Complete
sp_v3.0_unigene152441 SustainPine v3.0 360
AutoFact: mitochondrial ribosomal protein S25 [Trichoplax adhaerens] 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 7.958e-21
Complete
sp_v3.0_unigene153775 SustainPine v3.0 291
AutoFact: PREDICTED: similar to putative ribosomal protein S25 n=1 Tax=Ciona intestinalis RepID=UPI000180B8F1 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 7.671e-21
N-terminus
sp_v3.0_unigene157549 SustainPine v3.0 231
AutoFact: Signal recognition particle 54 kDa protein, putative n=2 Tax=Plasmodium (Plasmodium) RepID=A5K3Q7_PLAVS 9.0e-16
FL-Next: sp=Signal recognition particle 54 kDa protein 2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: SRP54 9.148e-12
Internal
sp_v3.0_unigene157958 SustainPine v3.0 213
AutoFact: Srp101p GTpase, signal recognition particle receptor alpha subunit n=2 Tax=Cryptosporidium RepID=Q5CV65_CRYPV 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain