Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Signal recognition particle, SRP54 subunit, GTPase

Term: IPR000897  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene37081 SustainPine v3.0 1793
AutoFact: TATA box binding protein (TBP) associated factor (TAF)-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 superfamily protein 1.226e-07
Putative C-terminus
sp_v3.0_unigene37719 SustainPine v3.0 1343
AutoFact: serine protease-like protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xylem serine proteinase 1, putative 0.0
Internal
sp_v3.0_unigene37738 SustainPine v3.0 1427
AutoFact: Ethylene-responsive transcription factor 1A n=1 Tax=Arabidopsis thaliana RepID=EF100_ARATH 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.46e-40
C-terminus
sp_v3.0_unigene37886 SustainPine v3.0 2427
AutoFact: subtilisin-like serine protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Subtilisin-like protease 0.0
C-terminus
sp_v3.0_unigene40492 SustainPine v3.0 2795
AutoFact: subtilisin-like serine protease 2 [Arabidopsis thaliana] emb|CAA17763.1| subtilisin proteinase-like [Arabidopsis thaliana] emb|CAB80215.1| subtilisin proteinase-like [Arabidopsis thaliana] gb|AAL67071.1| putative subtilisin serine protease [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Subtilisin-like protease 0.0
Complete
sp_v3.0_unigene45096 SustainPine v3.0 378
AutoFact: ERF protein n=1 Tax=Glycine max RepID=D9IXB2_SOYBN 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 2.8026e-45
C-terminus
sp_v3.0_unigene53433 SustainPine v3.0 359
AutoFact: Ethylene-responsive transcription factor 1B, putative 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.241e-36
Putative C-terminus
sp_v3.0_unigene56105 SustainPine v3.0 458
AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9SGA4_RICCO 8.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Subtilisin-like protease 1.24716e-43
Internal
sp_v3.0_unigene56245 SustainPine v3.0 322
AutoFact: Signal recognition particle receptor alpha subunit, putative n=1 Tax=Ricinus communis RepID=B9STS5_RICCO 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene58377 SustainPine v3.0 468
AutoFact: Peptidase_S8 domain containing protein 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xylem serine proteinase 1, putative 1.19194e-41
Internal
sp_v3.0_unigene60682 SustainPine v3.0 129
AutoFact: TATA-binding protein-associated factor MOT1, putative n=1 Tax=Ricinus communis RepID=B9SD95_RICCO 2.0e-14
FL-Next: tr=TATA-binding protein-associated factor MOT1, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene62266 SustainPine v3.0 340
AutoFact: phosphatidylinositol 3- and 4-kinase-like protein [Arabidopsis thaliana] gb|AAL31202.1| At1g13640/F21F23_7 [Arabidopsis thaliana] gb|AAN31098.1| At1g13640/F21F23_7 [Arabidopsis thaliana] gb|AEE29053.1| phosphatidylinositol 3- and 4-kinase-like protein [Ar 3.0e-12
FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene64775 SustainPine v3.0 215
AutoFact: Cell division protein ftsy, putative n=1 Tax=Ricinus communis RepID=B9RDL9_RICCO 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene65177 SustainPine v3.0 123
AutoFact: tRNA synthetase class I (ISS) [Ostreococcus tauri] emb|CAL55105.1| tRNA synthetase class I (ISS) [Ostreococcus tauri] 1.0e-11
FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Valine--tRNA ligase-like protein 5.596e-09
Internal
sp_v3.0_unigene66971 SustainPine v3.0 293
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene68860 SustainPine v3.0 241
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9N9M4_POPTR 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene69855 SustainPine v3.0 364
AutoFact: Ethylene-responsive transcription factor 1B, putative n=1 Tax=Ricinus communis RepID=B9S7J4_RICCO 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene73188 SustainPine v3.0 330
AutoFact: Development related ERF protein n=4 Tax=Oryza sativa RepID=Q0JB99_ORYSJ 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene75952 SustainPine v3.0 327
AutoFact: SNF2 superfamily chromatin remodeling protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D3Q8_LACBS 4.0e-36
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SNF2 super family 2.68e-06
Internal
sp_v3.0_unigene76067 SustainPine v3.0 386
AutoFact: Unassigned protein 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain