Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Signal recognition particle, SRP54 subunit, GTPase

Term: IPR000897  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene21074 SustainPine v3.0 638
• AutoFact: Serine protease-like protein n=1 Tax=Nicotiana tabacum RepID=Q8H0H9_TOBAC 0.0
• FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Xylem serine proteinase 1, putative 2.513e-32
Internal
sp_v3.0_unigene22453 SustainPine v3.0 583
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9NBC4_POPTR 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.002e-33
N-terminus
sp_v3.0_unigene23716 SustainPine v3.0 2797
• AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9SHW1_RICCO 0.0
• FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Xylem serine proteinase 1, putative 1.206e-30
C-terminus
sp_v3.0_unigene24126 SustainPine v3.0 464
• AutoFact: Ribosomal protein S25 n=1 Tax=Lepidochitona cinerea RepID=E3P7H5_9MOLL 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S25 4.226e-16
Complete
sp_v3.0_unigene24131 SustainPine v3.0 710
• AutoFact: Ethylene responsive transcription factor 1a n=1 Tax=Prunus salicina RepID=C0J9I9_9ROSA 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 5.108e-31
C-terminus
sp_v3.0_unigene24249 SustainPine v3.0 685
• AutoFact: Cell division protein ftsy, putative n=1 Tax=Ricinus communis RepID=B9RDL9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene24714 SustainPine v3.0 2663
• AutoFact: putative receptor protein kinase [Arabidopsis thaliana] dbj|BAB09644.1| protein kinase-like protein [Arabidopsis thaliana] gb|AAL91617.1| AT5g59010/k19m22_210 [Arabidopsis thaliana] gb|ABH04487.1| At5g59010 [Arabidopsis thaliana] gb|AED97129.1| putative r 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Receptor protein kinase, putative 1.97e-20
Complete
sp_v3.0_unigene25976 SustainPine v3.0 451
• AutoFact: Phosphatidylinositol 3-and 4-kinase family protein / ubiquitin family protein n=2 Tax=Arabidopsis RepID=Q9FNF8_ARATH 4.0e-22
• FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene28279 SustainPine v3.0 3195
• AutoFact: Subtilisin-like proteinase-like n=3 Tax=Oryza sativa RepID=Q9AX30_ORYSJ 0.0
• FL-Next: sp=Subtilisin-like protease; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Subtilisin-like protease 8.54792e-44
Complete
sp_v3.0_unigene28978 SustainPine v3.0 504
• AutoFact: ERF transcription factor n=1 Tax=Camellia sinensis RepID=D3Y3E0_CAMSI 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.3985e-42
C-terminus
sp_v3.0_unigene30570 SustainPine v3.0 1029
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L111_MALDO 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.4013e-45
Putative Complete
sp_v3.0_unigene30666 SustainPine v3.0 1627
• AutoFact: Subtilisin-like protein n=1 Tax=Picea abies RepID=Q40764_PICAB 0.0
• FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Xylem serine proteinase 1, putative 1.0e-22
C-terminus
sp_v3.0_unigene30931 SustainPine v3.0 370
• AutoFact: PREDICTED: similar to putative ribosomal protein S25 n=1 Tax=Ciona intestinalis RepID=UPI000180B8F1 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S25 4.575e-16
Complete
sp_v3.0_unigene31139 SustainPine v3.0 445
• AutoFact: Ribosomal protein S25 n=3 Tax=Ixodidae RepID=Q4PM82_IXOSC 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S25 1.897e-20
Complete
sp_v3.0_unigene31621 SustainPine v3.0 859
• AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 0.0
• FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Complete
sp_v3.0_unigene31736 SustainPine v3.0 574
• AutoFact: initiator tRNA phosphoribosyl transferase-like protein [Arabidopsis thaliana] gb|AAP37680.1| At2g40570 [Arabidopsis thaliana] dbj|BAE99980.1| putative initiator tRNA phosphoribosyl-transferase [Arabidopsis thaliana] gb|AEC09849.1| initiator tRNA phosphori 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative initiator tRNA phosphoribosyl-transferase 1.475e-09
N-terminus
sp_v3.0_unigene32567 SustainPine v3.0 500
• AutoFact: Putative ribosomal protein S25 (Fragment) n=1 Tax=Crassostrea gigas RepID=Q70MT3_CRAGI 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S25 3.587e-16
Complete
sp_v3.0_unigene33155 SustainPine v3.0 2122
• AutoFact: signal recognition particle subunit [Arabidopsis thaliana] sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic; Short=54 chloroplast protein; Short=54CP; Short=SRP54; AltName: Full=FFC; Flags: Precursor emb|CAA7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene35620 SustainPine v3.0 921
• AutoFact: Ethylene-responsive transcription factor 1A n=1 Tax=Medicago truncatula RepID=A9P6A4_MEDTR 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.4013e-45
Internal
sp_v3.0_unigene36491 SustainPine v3.0 1316
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L125_MALDO 7.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 2.336e-38
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain