Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Signal recognition particle, SRP54 subunit, GTPase

Term: IPR000897  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene9867 SustainPine v3.0 1520
AutoFact: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] gb|AEC09286.1| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 1-aminocyclopropane-1-carboxylate oxidase, putative 4.999e-10
Complete
sp_v3.0_unigene9944 SustainPine v3.0 309
AutoFact: DUF3535 domain containing protein 4.0e-12
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene10080 SustainPine v3.0 970
AutoFact: DUF3535 domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: SNF2 super family 2.192e-06
Internal
sp_v3.0_unigene10485 SustainPine v3.0 524
AutoFact: putative valyl-tRNA synthetase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Valine--tRNA ligase-like protein 1.408e-08
Internal
sp_v3.0_unigene11617 SustainPine v3.0 2534
AutoFact: subtilisin-like serine protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Subtilisin-like protease 4.19002e-41
Complete
sp_v3.0_unigene12040 SustainPine v3.0 843
AutoFact: Subtilase family protein [Arabidopsis thaliana] gb|AED97236.1| Subtilase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Subtilisin-like protease 1.52742e-43
Putative C-terminus
sp_v3.0_unigene12383 SustainPine v3.0 890
AutoFact: TATA-binding protein-associated factor MOT1, putative n=1 Tax=Ricinus communis RepID=B9SD95_RICCO 0.0
FL-Next: tr=TATA-binding protein-associated factor MOT1, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene12523 SustainPine v3.0 591
AutoFact: Putative SNF2 domain-containing protein n=2 Tax=Oryza sativa RepID=Q6H7U1_ORYSJ 0.0
FL-Next: sp=Putative chromatin-remodeling complex ATPase chain; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SNF2 super family 2.889e-06
Internal
sp_v3.0_unigene13111 SustainPine v3.0 455
AutoFact: Importin beta-3, putative n=1 Tax=Ricinus communis RepID=B9T1E9_RICCO 0.0
FL-Next: tr=Importin beta-3, putative; Ricinus communis (Castor bean). 0.0
Sma3: Importin beta-3, putative 1.327e-08
Internal
sp_v3.0_unigene13248 SustainPine v3.0 1997
AutoFact: serine protease-like protein [Nicotiana tabacum] 0.0
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Xylem serine proteinase 1, putative 8.15556e-43
C-terminus
sp_v3.0_unigene13614 SustainPine v3.0 1127
AutoFact: Ethylene-responsive transcription factor 1A n=1 Tax=Medicago truncatula RepID=A9P6A4_MEDTR 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
Putative Complete
sp_v3.0_unigene13724 SustainPine v3.0 1192
AutoFact: putative karyopherin-beta 3 variant [Oryza sativa Japonica Group] dbj|BAD30239.1| putative karyopherin-beta 3 variant [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Importin beta-3, putative 2.427e-13
Putative N-terminus
sp_v3.0_unigene14360 SustainPine v3.0 2080
AutoFact: zf-MIZ domain containing protein 5.0e-06
FL-Next: sp=E3 SUMO-protein ligase SIZ2; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene16875 SustainPine v3.0 919
AutoFact: Ethylene-responsive element binding factor-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZDA4_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 8.617e-33
Complete
sp_v3.0_unigene16898 SustainPine v3.0 1445
AutoFact: Transcription factor AP2-EREBP n=1 Tax=Lotus japonicus RepID=B3IX32_LOTJA 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 2.88667e-43
Complete
sp_v3.0_unigene17635 SustainPine v3.0 564
AutoFact: Ethylene responsive element binding protein C4 n=2 Tax=Capsicum annuum RepID=Q32W72_CAPAN 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
C-terminus
sp_v3.0_unigene18738 SustainPine v3.0 940
AutoFact: Ethylene-responsive element binding factor-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZDA4_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 2.918e-31
Complete
sp_v3.0_unigene18960 SustainPine v3.0 437
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L125_MALDO 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene20125 SustainPine v3.0 2023
AutoFact: Subtilisin-like protein n=1 Tax=Picea abies RepID=Q40764_PICAB 0.0
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Xylem serine proteinase 1, putative 1.623e-21
C-terminus
sp_v3.0_unigene20568 SustainPine v3.0 691
AutoFact: Ethylene-responsive transcription factor 1 n=1 Tax=Solanum lycopersicum RepID=ERF1_SOLLC 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 3.892e-31
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain