Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter, conserved site

Term: IPR017871  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene192661 SustainPine v3.0 703
• AutoFact: Protein-transport Sec61 protein subunit alpha, putative n=3 Tax=Cryptosporidium RepID=B6AFB4_CRYMR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sec61 transport protein 1.386e-08
Internal
sp_v3.0_unigene192675 SustainPine v3.0 356
• AutoFact: PREDICTED: similar to ATP-binding cassette, sub-family D, member 3 n=1 Tax=Ciona intestinalis RepID=UPI000180AF67 6.0e-40
• FL-Next: sp=ABC transporter D family member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-binding cassette superfamily 1.267e-07
C-terminus
sp_v3.0_unigene192771 SustainPine v3.0 481
• AutoFact: ATP-binding cassette, sub-family F, member 2-like [Danio rerio] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette superfamily 1.732e-09
C-terminus
sp_v3.0_unigene192928 SustainPine v3.0 401
• AutoFact: ABC transporter A family protein n=1 Tax=Polysphondylium pallidum RepID=D3BE51_POLPA 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Abc transporter, putative 2.194e-08
Internal
sp_v3.0_unigene193186 SustainPine v3.0 446
• AutoFact: Excinuclease ABC, A subunit n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FBB4_FLAJ1 0.0
• FL-Next: tr=Peptide exporter, ABC transporter family protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene193574 SustainPine v3.0 535
• AutoFact: Pretranslocation protein, alpha subunit, putative n=3 Tax=Trypanosoma cruzi RepID=E7L4Q4_TRYCR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sec61 transport protein 1.508e-08
C-terminus
sp_v3.0_unigene193677 SustainPine v3.0 421
• AutoFact: ATP-binding cassette transporter, subfamily B, member 6, group TAP protein PpABCB6 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TRT8_PHYPA 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene194155 SustainPine v3.0 480
• AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RLA2_SELML 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 9.68e-20
Putative N-terminus
sp_v3.0_unigene194288 SustainPine v3.0 411
• AutoFact: ATP-binding cassette transporter, subfamily A, member 2, group ATH protein PpABCA2 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T1J1_PHYPA 1.0e-05
• FL-Next: sp=ABC transporter A family member 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene194307 SustainPine v3.0 412
• AutoFact: somatic embryogenesis receptor kinase [Cocos nucifera] 0.0
• FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 9.95e-21
Internal
sp_v3.0_unigene194462 SustainPine v3.0 498
• AutoFact: ABC transporter family, pleiotropic drug resistance protein n=1 Tax=Populus trichocarpa RepID=B9GGM3_POPTR 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene195253 SustainPine v3.0 170
• AutoFact: Acetyl-CoA carboxylase n=7 Tax=rosids RepID=D2CFN2_9ROSI 2.0e-11
• FL-Next: sp=Acetyl-CoA carboxylase 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Acetyl-CoA carboxylase 1.541e-07
Putative N-terminus
sp_v3.0_unigene195834 SustainPine v3.0 312
• AutoFact: Kinase-like protein pac.Erf.10 (Fragment) n=1 Tax=Platanus x acerifolia RepID=B6D3Q7_PLAAC 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase-like protein 4.002e-10
Internal
sp_v3.0_unigene195944 SustainPine v3.0 209
• AutoFact: ATP-binding cassette transporter n=1 Tax=Selaginella moellendorffii RepID=D8T797_SELML 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene196021 SustainPine v3.0 204
• AutoFact: putative amino acid or GABA permease [Arabidopsis thaliana] 2.0e-24
• FL-Next: sp=Amino-acid permease BAT1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative GABA-specific permease 3.714e-16
Internal
sp_v3.0_unigene196169 SustainPine v3.0 148
• AutoFact: monosaccharide transporter 2 [Olea europaea] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sugar transporter, putative 3.506e-08
Internal
sp_v3.0_unigene196395 SustainPine v3.0 305
• AutoFact: nitrate transporter NTL1 [Arabidopsis thaliana] 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nitrate transporter, putative 4.098e-15
Internal
sp_v3.0_unigene197026 SustainPine v3.0 304
• AutoFact: MRP-like ABC transporter [Oryza sativa Japonica Group] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Putative N-terminus
sp_v3.0_unigene197094 SustainPine v3.0 745
• AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene197432 SustainPine v3.0 366
• AutoFact: pfam12799, LRR_4, Leucine Rich repeats (2 copies) 9.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine-threonine protein kinase, plant-type, putative 1.473e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain