Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter, conserved site

Term: IPR017871  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene158044 SustainPine v3.0 331
• AutoFact: Elongation factor EF-3 n=1 Tax=Ectocarpus siliculosus RepID=D7FW62_ECTSI 2.0e-12
• FL-Next: tr=Elongation factor EF-3; Ectocarpus siliculosus (Brown alga). 0.0
• Sma3: ABC cassette-containing protein 8.772e-06
C-terminus
sp_v3.0_unigene158078 SustainPine v3.0 173
• AutoFact: PREDICTED: similar to ATP-binding cassette C5 splicing variant A n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E477C8 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158221 SustainPine v3.0 370
• AutoFact: his-tagged-multidrug resistance glycoprotein MDR1 [synthetic construct] 2.0e-26
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene158421 SustainPine v3.0 177
• AutoFact: ATP-binding Cassette (ABC) Superfamily n=3 Tax=Phytophthora infestans T30-4 RepID=D0NMB1_PHYIT 6.0e-18
• FL-Next: tr=ATP-binding Cassette (ABC) Superfamily; Phytophthora infestans (strain T30-4) (Potato late blight fungus). 0.0
• Sma3: Pleiotropic drug resistance transporter 5.361e-06
Internal
sp_v3.0_unigene158432 SustainPine v3.0 186
• AutoFact: ABC transporter, ATP-binding/permease protein n=3 Tax=Rhodobacteraceae RepID=A9F879_9RHOB 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ABC transporter-like protein 1.16e-09
Internal
sp_v3.0_unigene158545 SustainPine v3.0 215
• AutoFact: Protein transport protein SEC61 alpha subunit n=2 Tax=Dictyosteliida RepID=F4Q5L5_9MYCE 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sec61 transport protein 1.488e-08
Internal
sp_v3.0_unigene158697 SustainPine v3.0 252
• AutoFact: ABC transporter family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CD8B4 8.0e-32
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: ATP binding cassette (Abc) transporter, putative 2.704e-08
Internal
sp_v3.0_unigene158716 SustainPine v3.0 397
• AutoFact: Acyl-CoA dehydrogenase n=5 Tax=Ajellomyces RepID=C5GGN0_AJEDR 7.0e-39
• FL-Next: tr=Cytochrome b5-like protein; Micromonas pusilla (strain CCMP1545) (Picoplanktonic green alga). 0.0
C-terminus
sp_v3.0_unigene158806 SustainPine v3.0 270
• AutoFact: ABC transporter related protein n=1 Tax=Alicycliphilus denitrificans BC RepID=E8TY52_ALIDB 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MDR-like ABC transporter 9.529e-28
Internal
sp_v3.0_unigene158840 SustainPine v3.0 413
• AutoFact: ATP-binding cassette transporter [Pteris vittata] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ABC transporter 7.78e-11
Internal
sp_v3.0_unigene158932 SustainPine v3.0 268
• AutoFact: [V] COG1132 ABC-type multidrug transport system, ATPase and permease components 6.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ABC transporter, multidrug resistance associated protein 1.394e-11
Putative C-terminus
sp_v3.0_unigene159556 SustainPine v3.0 435
• AutoFact: structural maintenance of chromosomes protein 2-2 [Arabidopsis thaliana] sp|Q9SN90.1|SMC22_ARATH RecName: Full=Structural maintenance of chromosomes protein 2-2; Short=AtSMC2-2; AltName: Full=Chromosome-associated protein E-2; Short=AtCAP-E2 emb|CAB61972. 1.0e-24
• FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Condensin complex components subunit 4.493e-08
Internal
sp_v3.0_unigene159611 SustainPine v3.0 474
• AutoFact: PDR-type ABC transporter 2 [Nicotiana tabacum] 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene159713 SustainPine v3.0 292
• AutoFact: Endo-1,3(4)-beta-glucanase, putative n=1 Tax=Ricinus communis RepID=B9TG99_RICCO 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucan binding protein 2.495e-09
Internal
sp_v3.0_unigene159850 SustainPine v3.0 273
• AutoFact: ABC transporter G family member 35 n=2 Tax=Arabidopsis RepID=AB35G_ARATH 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_74, whole genome shotgun sequence 3.263e-08
Internal
sp_v3.0_unigene159945 SustainPine v3.0 285
• AutoFact: ATP-binding cassette transporter, subfamily B, member 16, group MDR/PGP protein PpABCB16 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TKP2_PHYPA 9.0e-34
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene159976 SustainPine v3.0 448
• AutoFact: LRR receptor-like serine/threonine-protein kinase EFR [Arabidopsis thaliana] sp|C0LGT6.1|EFR_ARATH RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR; AltName: Full=Elongation factor Tu receptor; Short=EF-Tu receptor; Flags: Precursor gb| 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine Rich Repeat, putative 1.699e-18
Putative Complete
sp_v3.0_unigene160113 SustainPine v3.0 146
• AutoFact: Uroporphyrinogen decarboxylase n=1 Tax=Ricinus communis RepID=B9SGB6_RICCO 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Uroporphyrinogen decarboxylase 2.562e-13
Putative C-terminus
sp_v3.0_unigene160172 SustainPine v3.0 426
• AutoFact: MDR-like ABC transporter n=4 Tax=Poaceae RepID=Q8GU74_ORYSJ 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 5.292e-06
Internal
sp_v3.0_unigene160204 SustainPine v3.0 430
• AutoFact: Sugar transport protein 7 n=2 Tax=Arabidopsis RepID=STP7_ARATH 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sugar transporter, putative 1.261e-31
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain