Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter, conserved site

Term: IPR017871  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene151980 SustainPine v3.0 274
• AutoFact: Structural maintenance of chromosomes 1-like 1 (Fragment) n=2 Tax=Microtus RepID=D5KWP1_MICAR 2.0e-27
• FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Condensin complex component 8.716e-08
N-terminus
sp_v3.0_unigene152082 SustainPine v3.0 470
• AutoFact: PREDICTED: ATP-binding cassette sub-family D member 1 isoform 2 [Macaca mulatta] 8.0e-28
• FL-Next: sp=ABC transporter D family member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative ABC transporter 3.697e-06
C-terminus
sp_v3.0_unigene152301 SustainPine v3.0 272
• AutoFact: ATP-binding cassette sub-family F member 1 [Xenopus laevis] gb|AAH81034.1| MGC81714 protein [Xenopus laevis] 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent transporter, putative 3.488e-07
Putative C-terminus
sp_v3.0_unigene152451 SustainPine v3.0 509
• AutoFact: Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Segniliparus rugosus ATCC BAA-974 RepID=E5XUC3_9ACTO 3.0e-37
• FL-Next: tr=Acyl-CoA dehydrogenase NM domain-like protein; Coccomyxa subellipsoidea C-169. 0.0
C-terminus
sp_v3.0_unigene152514 SustainPine v3.0 377
• AutoFact: Acetyl-CoA carboxylase n=1 Tax=Dictyostelium purpureum RepID=F1A0W2_DICPU 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acetyl-CoA carboxylase 5.397e-22
Putative N-terminus
sp_v3.0_unigene152787 SustainPine v3.0 512
• AutoFact: probable acyl-CoA dehydrogenase (ISS) [Ostreococcus tauri] emb|CAL56520.1| probable acyl-CoA dehydrogenase (ISS) [Ostreococcus tauri] 0.0
• FL-Next: tr=Predicted protein; Ostreococcus lucimarinus (strain CCE9901). 0.0
C-terminus
sp_v3.0_unigene152888 SustainPine v3.0 391
• AutoFact: egg permeability glycoprotein [Strongylocentrotus purpuratus] gb|AAW28777.1| egg permeability glycoprotein [Strongylocentrotus purpuratus] 6.02558e-44
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene152943 SustainPine v3.0 160
• AutoFact: ABC transporter family, cholesterol/phospholipid flippase n=1 Tax=Populus trichocarpa RepID=B9H9T2_POPTR 3.0e-17
• FL-Next: sp=ABC transporter A family member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene152947 SustainPine v3.0 525
• AutoFact: UvrABC system protein B n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7U7_9GAMM 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Exinuclease ABC subunits B and C-containing protein 4.289e-10
Putative C-terminus
sp_v3.0_unigene153177 SustainPine v3.0 243
• AutoFact: ABC transporter A family member 9 [Arabidopsis thaliana] gb|AED97510.1| ABC transporter A family member 9 [Arabidopsis thaliana] 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ABC transporter family, retinal flippase subfamily 1.547e-07
Internal
sp_v3.0_unigene153184 SustainPine v3.0 490
• AutoFact: Multidrug resistance protein 1, 2, 3 (P glycoprotein 1, 2, 3) n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1CVJ9_NEOFI 6.0e-31
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene153318 SustainPine v3.0 508
• AutoFact: Structural maintenance of chromosomes protein 3 n=50 Tax=Euteleostomi RepID=SMC3_HUMAN 0.0
• FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SMC3 protein 3.168e-09
N-terminus
sp_v3.0_unigene153392 SustainPine v3.0 464
• AutoFact: PREDICTED: similar to Sec61, alpha subunit 2, partial n=2 Tax=Amniota RepID=UPI00003AFB1B 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sec61 transport protein 1.723e-08
C-terminus
sp_v3.0_unigene153451 SustainPine v3.0 258
• AutoFact: ATP-binding cassette transporter, subfamily C, member 12, SmABCC12 n=2 Tax=Selaginella moellendorffii RepID=D8RAX3_SELML 9.0e-16
• FL-Next: Isoform 2 of ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 0.0
Internal
sp_v3.0_unigene153555 SustainPine v3.0 300
• AutoFact: Elongation factor EF-3 n=1 Tax=Ectocarpus siliculosus RepID=D7FW62_ECTSI 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene153930 SustainPine v3.0 480
• AutoFact: Multidrug resistance protein 1a n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BXS4_9EUKA 1.4013e-45
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene153939 SustainPine v3.0 434
• AutoFact: ATP-binding Cassette (ABC) Superfamily n=1 Tax=Phytophthora infestans T30-4 RepID=D0N4B7_PHYIT 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Putative Complete
sp_v3.0_unigene154079 SustainPine v3.0 251
• AutoFact: PREDICTED: ATP-binding cassette sub-family F member 1-like isoform 1 [Apis mellifera] 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent transporter, putative 1.082e-10
C-terminus
sp_v3.0_unigene154163 SustainPine v3.0 295
• AutoFact: P-glycoprotein A [Caenorhabditis elegans] 2.0e-25
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene154443 SustainPine v3.0 275
• AutoFact: Sugar carrier protein A n=6 Tax=Andropogoneae RepID=B6TMZ9_MAIZE 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sugar transporter, putative 7.098e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain