Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter, conserved site

Term: IPR017871  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene26163 SustainPine v3.0 559
• AutoFact: eIF2B GDP-GTP exchange factor n=1 Tax=Dictyostelium fasciculatum RepID=F4PGT9_9MYCE 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Translation initiation factor 2b, delta subunit, putative 2.399e-09
C-terminus
sp_v3.0_unigene26232 SustainPine v3.0 396
• AutoFact: ABC transporter family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23AM3_TETTH 7.0e-31
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene26701 SustainPine v3.0 1698
• AutoFact: ABC transporter B family member 15 n=3 Tax=Arabidopsis RepID=AB15B_ARATH 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene26739 SustainPine v3.0 588
• AutoFact: White-brown-complex ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9HWN9_POPTR 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: White-brown-complex ABC transporter family 1.056e-14
C-terminus
sp_v3.0_unigene26830 SustainPine v3.0 845
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene27131 SustainPine v3.0 2097
• AutoFact: asparaginyl-tRNA synthetase, cytoplasmic 1 [Arabidopsis thaliana] sp|Q9SW96.1|SYNC1_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 1; AltName: Full=Asparagine--tRNA ligase 1; Short=AsnRS 1; AltName: Full=Protein EMBRYO DEFECTIVE 2755 gb|AAD4 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Aspartyl-tRNA synthetase, putative 2.487e-09
Complete
sp_v3.0_unigene27266 SustainPine v3.0 653
• AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 5.992e-37
Internal
sp_v3.0_unigene27335 SustainPine v3.0 712
• AutoFact: Elongation factor EF-3 n=1 Tax=Ectocarpus siliculosus RepID=D7FW62_ECTSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene27762 SustainPine v3.0 563
• AutoFact: ABC transporter E family member 2 n=13 Tax=Spermatophyta RepID=AB2E_ARATH 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNase L inhibitor-like protein 7.961e-08
N-terminus
sp_v3.0_unigene27790 SustainPine v3.0 737
• AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9SS80_RICCO 1.0e-28
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Serine-threonine protein kinase, plant-type, putative 6.114e-14
N-terminus
sp_v3.0_unigene27797 SustainPine v3.0 1441
• AutoFact: Receptor serine-threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RT11_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Receptor serine-threonine protein kinase, putative 5.142e-32
C-terminus
sp_v3.0_unigene27894 SustainPine v3.0 961
• AutoFact: PDR-like ABC-transporter n=1 Tax=Glycine max RepID=Q1M2R7_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
C-terminus
sp_v3.0_unigene27914 SustainPine v3.0 633
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SMW3_RICCO 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
N-terminus
sp_v3.0_unigene27987 SustainPine v3.0 2172
• AutoFact: protein kinase family protein [Arabidopsis thaliana] gb|AAM78107.1| AT4g02010/T10M13_2 [Arabidopsis thaliana] gb|AAP88328.1| At4g02010/T10M13_2 [Arabidopsis thaliana] gb|AEE82111.1| protein kinase family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Receptor serine-threonine protein kinase, putative 2.939e-21
Putative Complete
sp_v3.0_unigene28064 SustainPine v3.0 1027
• AutoFact: putative leucine rich repeat containing protein kinase [Oryza sativa Japonica Group] gb|AAM18148.1|AC092172_8 Putative leucine rich repeat containing protein kinase [Oryza sativa Japonica Group] gb|AAP52742.1| Leucine Rich Repeat family protein, expressed 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine Rich Repeat, putative 2.151e-28
C-terminus
sp_v3.0_unigene28363 SustainPine v3.0 661
• AutoFact: putative protein kinase Xa21 [Oryza sativa Japonica Group] dbj|BAD69462.1| putative protein kinase Xa21 [Oryza sativa Japonica Group] 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene28435 SustainPine v3.0 692
• AutoFact: Elongation factor 3, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NKR0_PHYIT 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ABC transporter 4.564e-06
C-terminus
sp_v3.0_unigene28438 SustainPine v3.0 630
• AutoFact: Similar to peptide transporter [Arabidopsis thaliana] 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 2.275e-31
C-terminus
sp_v3.0_unigene28607 SustainPine v3.0 1149
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SMW2_RICCO 5.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 8.40779e-45
N-terminus
sp_v3.0_unigene28619 SustainPine v3.0 863
• AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9T755_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 3.247e-30
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain