Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter, conserved site

Term: IPR017871  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene17992 SustainPine v3.0 2044
• AutoFact: [E] COG2303 Choline dehydrogenase and related flavoproteins 1.0e-31
• FL-Next: sp=Protein HOTHEAD; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein HOTHEAD 4.269e-15
Complete
sp_v3.0_unigene18024 SustainPine v3.0 1372
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SSI9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger protein, putative 8.965e-18
Complete
sp_v3.0_unigene18040 SustainPine v3.0 1203
• AutoFact: ABC transporter I family member 17 [Arabidopsis thaliana] sp|Q9C9W0.1|AB17I_ARATH RecName: Full=ABC transporter I family member 17; Short=ABC transporter ABCI.17; Short=AtABCI17; AltName: Full=MRP-related protein 1; AltName: Full=Non-intrinsic ABC protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene18351 SustainPine v3.0 1101
• AutoFact: Acyl-[acyl-carrier-protein] desaturase n=1 Tax=Picea sitchensis RepID=A9NVD4_PICSI 0.0
• FL-Next: sp=Acyl-[acyl-carrier-protein] desaturase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl-[acyl-carrier protein] desaturase 0.0
N-terminus
sp_v3.0_unigene18533 SustainPine v3.0 1224
• AutoFact: putative protein kinase [Zea mays] gb|ABM21450.1| putative protein kinase [Zea mays] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase PBS1, putative 5.48e-13
C-terminus
sp_v3.0_unigene18588 SustainPine v3.0 1141
• AutoFact: Pto-interacting protein 1 n=2 Tax=Solanoideae RepID=PTI1_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Receptor serine-threonine protein kinase, putative 9.131e-10
N-terminus
sp_v3.0_unigene18886 SustainPine v3.0 658
• AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9S7C1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: POT family protein, expressed 4.037e-24
N-terminus
sp_v3.0_unigene18975 SustainPine v3.0 482
• AutoFact: RecName: Full=Pleiotropic drug resistance protein 1; AltName: Full=NtPDR1 dbj|BAD07483.1| PDR-type ABC transporter 1 [Nicotiana tabacum] 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 2.233e-28
N-terminus
sp_v3.0_unigene19049 SustainPine v3.0 517
• AutoFact: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative n=1 Tax=Ricinus communis RepID=B9SKL4_RICCO 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Internal
sp_v3.0_unigene19109 SustainPine v3.0 223
• AutoFact: protein serine/threonine kinase BNK1 [Brassica napus] 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Receptor serine-threonine protein kinase, putative 5.376e-32
Internal
sp_v3.0_unigene19134 SustainPine v3.0 692
• AutoFact: LRRNT_2 domain containing protein 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine-threonine protein kinase, plant-type, putative 5.091e-29
Putative Complete
sp_v3.0_unigene19207 SustainPine v3.0 2756
• AutoFact: putative ABC transporter [Hordeum vulgare subsp. vulgare] 0.0
• FL-Next: sp=ABC transporter B family member 25; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Chromosome chr17 scaffold_101, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene19233 SustainPine v3.0 441
• AutoFact: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative n=1 Tax=Ricinus communis RepID=B9SAP4_RICCO 3.00004e-41
• FL-Next: sp=ABC transporter C family member 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 2.874e-06
Internal
sp_v3.0_unigene19234 SustainPine v3.0 637
• AutoFact: Leucine Rich Repeat family protein n=3 Tax=Oryza sativa RepID=Q53PD7_ORYSJ 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene19272 SustainPine v3.0 379
• AutoFact: ABC transporter family, cholesterol/phospholipid flippase n=1 Tax=Populus trichocarpa RepID=B9H9T2_POPTR 0.0
• FL-Next: sp=ABC transporter A family member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene19580 SustainPine v3.0 320
• AutoFact: monosaccharide transporter [Populus tremula x Populus tremuloides] 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sugar transporter, putative 1.351e-24
Misassembled
sp_v3.0_unigene19632 SustainPine v3.0 432
• AutoFact: Receptor-like protein kinase n=1 Tax=Capsicum annuum RepID=D3G6F0_CAPAN 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-receptor kinase, putative 1.05e-10
Internal
sp_v3.0_unigene19913 SustainPine v3.0 423
• AutoFact: ABC transporter B family member 20 n=6 Tax=Arabidopsis RepID=AB20B_ARATH 2.0e-39
• FL-Next: sp=ABC transporter B family member 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 3.384e-06
Internal
sp_v3.0_unigene20213 SustainPine v3.0 2604
• AutoFact: COBRA-like protein 7 [Arabidopsis thaliana] sp|Q8GZ17.2|COBL7_ARATH RecName: Full=COBRA-like protein 7; Flags: Precursor emb|CAB10391.1| hypothetical protein [Arabidopsis thaliana] emb|CAA74765.1| putative cell wall protein [Arabidopsis thaliana] emb|CAB7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein COBRA, putative 6.74e-15
Complete
sp_v3.0_unigene20343 SustainPine v3.0 996
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9I7G6_POPTR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain