Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter-like

Term: IPR003439  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene164044 SustainPine v3.0 404
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7U026_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
N-terminus
sp_v3.0_unigene164099 SustainPine v3.0 311
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 5.0e-30
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.642e-35
Internal
sp_v3.0_unigene164186 SustainPine v3.0 370
• AutoFact: Multidrug resistance protein ABC transporter family (Fragment) n=2 Tax=Populus trichocarpa RepID=B9N9A1_POPTR 6.0e-31
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Internal
sp_v3.0_unigene164190 SustainPine v3.0 267
• AutoFact: PREDICTED: similar to pol polyprotein, partial n=1 Tax=Nasonia vitripennis RepID=UPI00015B4525 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene164276 SustainPine v3.0 179
• AutoFact: ABC transporter family, retinal flippase subfamily n=1 Tax=Populus trichocarpa RepID=B9N4B1_POPTR 1.0e-10
• FL-Next: sp=ABC transporter A family member 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ABC transporter family, retinal flippase subfamily 5.566e-09
Internal
sp_v3.0_unigene164475 SustainPine v3.0 175
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 5.79e-10
Internal
sp_v3.0_unigene164560 SustainPine v3.0 275
• AutoFact: RecName: Full=Pleiotropic drug resistance protein 1; AltName: Full=NpPDR1 emb|CAC40990.1| ABC1 protein [Nicotiana plumbaginifolia] 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene164613 SustainPine v3.0 401
• AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene164643 SustainPine v3.0 446
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SRE5_RICCO 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene164797 SustainPine v3.0 338
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene164933 SustainPine v3.0 341
• AutoFact: Pleiotropic drug resistance protein n=1 Tax=Cucumis sativus RepID=C8CA13_CUCSA 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene165038 SustainPine v3.0 197
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RJZ3_RICCO 3.0e-20
• FL-Next: sp=Pleiotropic drug resistance protein TUR2; Spirodela polyrrhiza (Giant duckweed). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene165046 SustainPine v3.0 162
• AutoFact: Multidrug resistance-associated protein, putative n=1 Tax=Ricinus communis RepID=B9RGL4_RICCO 2.0e-18
• FL-Next: sp=ABC transporter C family member 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene165180 SustainPine v3.0 268
• AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT family dimerisation domain containing protein 2.296e-07
Internal
sp_v3.0_unigene165203 SustainPine v3.0 121
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RZZ4_RICCO 9.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene165218 SustainPine v3.0 141
• AutoFact: ABC transporter C family member 14 n=3 Tax=Arabidopsis RepID=AB14C_ARATH 2.0e-08
• FL-Next: sp=ABC transporter C family member 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene165474 SustainPine v3.0 342
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.628e-35
N-terminus
sp_v3.0_unigene165601 SustainPine v3.0 553
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9FNK5.1|FB285_ARATH RecName: Full=F-box protein At5g46170 dbj|BAB08262.1| unnamed protein product [Arabidopsis thaliana] gb|AAL49842.1| unknown protein [Arabidopsis thaliana] gb|AAN13195.1| unknown protein [Arabido 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F-box domain containing protein 3.718e-16
C-terminus
sp_v3.0_unigene166022 SustainPine v3.0 471
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family (Fragment) n=2 Tax=Populus trichocarpa RepID=B9IN63_POPTR 1.0e-15
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene166168 SustainPine v3.0 392
• AutoFact: ATP-binding cassette transporter, subfamily G, member 22, group PDR protein PpABCG22 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYR6_PHYPA 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 1.687e-39
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain