Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter-like

Term: IPR003439  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene129044 SustainPine v3.0 348
• AutoFact: ABC transporter 1-like protein [Rhodiola fastigiata] 6.0e-15
• FL-Next: sp=ABC transporter F family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ABC transporter family protein 3.454e-07
Internal
sp_v3.0_unigene129227 SustainPine v3.0 520
• AutoFact: ATP-binding cassette transporter n=1 Tax=Selaginella moellendorffii RepID=D8T797_SELML 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene129404 SustainPine v3.0 398
• AutoFact: MRP-like ABC transporter n=2 Tax=Oryza sativa Japonica Group RepID=Q8GU62_ORYSJ 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 1.123e-29
C-terminus
sp_v3.0_unigene129899 SustainPine v3.0 573
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9T195_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Putative C-terminus
sp_v3.0_unigene130231 SustainPine v3.0 576
• AutoFact: PDR-like ABC-transporter n=1 Tax=Glycine max RepID=Q1M2R7_SOYBN 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 9.143e-34
C-terminus
sp_v3.0_unigene130757 SustainPine v3.0 344
• AutoFact: Probable pleiotropic drug resistance protein 1 n=6 Tax=Oryza sativa RepID=PDR1_ORYSJ 2.0e-40
• FL-Next: sp=Probable pleiotropic drug resistance protein 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene130773 SustainPine v3.0 274
• AutoFact: ABC-type transport-like protein [Arabidopsis thaliana] 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ABC transporter family, retinal flippase subfamily 1.74e-08
Internal
sp_v3.0_unigene130907 SustainPine v3.0 372
• AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene130957 SustainPine v3.0 311
• AutoFact: White-brown-complex ABC transporter family (Fragment) n=1 Tax=Populus trichocarpa RepID=B9N349_POPTR 6.0e-25
• FL-Next: sp=ABC transporter G family member 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: White-brown-complex ABC transporter family 3.115e-06
Putative C-terminus
sp_v3.0_unigene131120 SustainPine v3.0 645
• AutoFact: RecName: Full=Putative multidrug resistance protein; AltName: Full=P-glycoprotein dbj|BAD16475.1| putative multidrug resistance p-glycoprotein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 5.57e-31
Internal
sp_v3.0_unigene131381 SustainPine v3.0 259
• AutoFact: ATP-binding cassette transporter, subfamily C, member 9, SmABCC9 n=2 Tax=Selaginella moellendorffii RepID=D8RCF5_SELML 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene131460 SustainPine v3.0 249
• AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] 1.0e-22
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene131797 SustainPine v3.0 512
• AutoFact: ATP-binding cassette transporter, subfamily C, member 4, SmABCC4 n=2 Tax=Selaginella moellendorffii RepID=D8RHJ5_SELML 7.00649e-43
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Internal
sp_v3.0_unigene132052 SustainPine v3.0 629
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IJP4_POPTR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene133167 SustainPine v3.0 339
• AutoFact: pfam01061, ABC2_membrane, ABC-2 type transporter 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 3.518e-18
Internal
sp_v3.0_unigene134033 SustainPine v3.0 281
• AutoFact: White-brown-complex ABC transporter family (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GG01_POPTR 6.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: White-brown-complex ABC transporter family 4.757e-16
Internal
sp_v3.0_unigene134189 SustainPine v3.0 303
• AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 3.0e-19
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 3.072e-11
Internal
sp_v3.0_unigene135541 SustainPine v3.0 243
• AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RLA2_SELML 8.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene136011 SustainPine v3.0 245
• AutoFact: ABC transporter homolog [Populus nigra] 9.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ABC transporter family protein 4.354e-06
Misassembled
sp_v3.0_unigene136152 SustainPine v3.0 291
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RGL9_RICCO 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 2.11736e-42
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain