Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: NB-ARC

Term: IPR002182  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene164171 SustainPine v3.0 363
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polyprotein 1.781e-07
Internal
sp_v3.0_unigene164314 SustainPine v3.0 206
• AutoFact: Resistance gene homolog, . (Fragment) n=1 Tax=Pinus radiata RepID=O49121_PINRA 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene164319 SustainPine v3.0 273
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 2.538e-11
Internal
sp_v3.0_unigene164438 SustainPine v3.0 252
• AutoFact: SERK family receptor-like protein kinase [Oryza sativa Japonica Group] 4.0e-17
• FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
• Sma3: Chromosome chr12 scaffold_238, whole genome shotgun sequence 1.185e-06
Internal
sp_v3.0_unigene164454 SustainPine v3.0 335
• AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Beta procumbens RepID=Q8L4Q2_BETPR 2.0e-28
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.8026e-45
Internal
sp_v3.0_unigene164465 SustainPine v3.0 219
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene164475 SustainPine v3.0 175
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 5.79e-10
Internal
sp_v3.0_unigene164489 SustainPine v3.0 470
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.738e-27
Internal
sp_v3.0_unigene164583 SustainPine v3.0 347
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 1.229e-07
Internal
sp_v3.0_unigene164685 SustainPine v3.0 179
• AutoFact: F20P5.25 protein n=1 Tax=Arabidopsis thaliana RepID=O04543_ARATH 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene164717 SustainPine v3.0 391
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 1.328e-10
Internal
sp_v3.0_unigene164766 SustainPine v3.0 190
• AutoFact: Unassigned protein 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene164797 SustainPine v3.0 338
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene165032 SustainPine v3.0 284
• AutoFact: Putative truncated TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS7_PINMO 2.0e-05
• FL-Next: tr=Putative truncated TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
Internal
sp_v3.0_unigene165073 SustainPine v3.0 263
• AutoFact: Cc-nbs-lrr resistance protein n=1 Tax=Populus trichocarpa RepID=B9I7F8_POPTR 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165095 SustainPine v3.0 179
• AutoFact: Putative CC-NBS-LRR protein (Fragment) n=4 Tax=Pinus monticola RepID=A5WZ07_PINMO 7.0e-20
• FL-Next: tr=CC-NBS-LRR resistance-like protein; Pinus lambertiana (Sugar pine). 0.0
• Sma3: Putative CC-NBS-LRR protein 3.71e-32
Internal
sp_v3.0_unigene165163 SustainPine v3.0 203
• AutoFact: Putative CC-NBS-LRR protein (Fragment) n=1 Tax=Pinus monticola RepID=A5WZ01_PINMO 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165297 SustainPine v3.0 449
• AutoFact: Putative truncated TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS7_PINMO 5.0e-18
• FL-Next: tr=Putative truncated TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
• Sma3: Putative NBS-LRR protein G9044 5.361e-06
Internal
sp_v3.0_unigene165404 SustainPine v3.0 390
• AutoFact: Disease resistance associated protein (Fragment) n=8 Tax=Pinaceae RepID=Q2VWL9_PICAB 6.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene165406 SustainPine v3.0 470
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative gag-pol polyprotein 1.536e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain