Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Leucine-rich repeat

Term: IPR001611  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene189947 SustainPine v3.0 536
• AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 4.393e-17
Putative N-terminus
sp_v3.0_unigene190437 SustainPine v3.0 417
• AutoFact: Ribosomal protein S3a n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C281_9EUKA 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 3.295e-17
C-terminus
sp_v3.0_unigene190731 SustainPine v3.0 461
• AutoFact: LRR_4 domain containing protein 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_222, whole genome shotgun sequence 7.866e-11
Internal
sp_v3.0_unigene190884 SustainPine v3.0 336
• AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 9.0e-31
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Copia-type polyprotein 1.692e-10
Putative C-terminus
sp_v3.0_unigene190910 SustainPine v3.0 234
• AutoFact: Leucine-rich repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAU9_RICCO 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene191673 SustainPine v3.0 471
• AutoFact: Glutathione peroxidase n=8 Tax=Rhipicephalinae RepID=Q2XW15_BOOMI 0.0
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
N-terminus
sp_v3.0_unigene191959 SustainPine v3.0 511
• AutoFact: 60S ribosomal protein L7 n=1 Tax=Phytophthora infestans T30-4 RepID=D0N7N5_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7 4.565e-11
Internal
sp_v3.0_unigene192256 SustainPine v3.0 534
• AutoFact: Os07g0121200 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0D8X3_ORYSJ 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene192505 SustainPine v3.0 508
• AutoFact: Putative 3-ketoacyl-CoA reductase n=1 Tax=Ectocarpus siliculosus RepID=D7FNT1_ECTSI 7.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative b-keto acyl reductase 8.65e-22
Internal
sp_v3.0_unigene192698 SustainPine v3.0 200
• AutoFact: N2-C protein n=1 Tax=Linum usitatissimum RepID=Q9ARB3_LINUS 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene192782 SustainPine v3.0 422
• AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene193359 SustainPine v3.0 357
• AutoFact: Unassigned protein 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene193856 SustainPine v3.0 486
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.2039e-45
Internal
sp_v3.0_unigene193968 SustainPine v3.0 570
• AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS 2.0e-39
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.18e-18
C-terminus
sp_v3.0_unigene194307 SustainPine v3.0 412
• AutoFact: somatic embryogenesis receptor kinase [Cocos nucifera] 0.0
• FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 9.95e-21
Internal
sp_v3.0_unigene194418 SustainPine v3.0 493
• AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.935e-12
Internal
sp_v3.0_unigene194558 SustainPine v3.0 303
• AutoFact: RVT_2 domain containing protein 6.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polyprotein 1.842e-07
N-terminus
sp_v3.0_unigene194616 SustainPine v3.0 429
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene194679 SustainPine v3.0 640
• AutoFact: Putative truncated TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS7_PINMO 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene194824 SustainPine v3.0 477
• AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 8.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain