Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S10, conserved site

Term: IPR018268  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene93862 SustainPine v3.0 1574
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 2.664e-28
Misassembled
sp_v3.0_unigene94281 SustainPine v3.0 938
• AutoFact: 40S ribosomal protein S20-1 n=12 Tax=rosids RepID=RS201_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene94379 SustainPine v3.0 1461
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 2.88667e-42
C-terminus
sp_v3.0_unigene95632 SustainPine v3.0 1690
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 1.69837e-42
Putative Complete
sp_v3.0_unigene100402 SustainPine v3.0 1185
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5A9Z6_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 1.098e-31
C-terminus
sp_v3.0_unigene101462 SustainPine v3.0 697
• AutoFact: [Q] COG3424 Predicted naringenin-chalcone synthase 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-ketoacyl-coa synthase family protein 4.086e-40
C-terminus
sp_v3.0_unigene108145 SustainPine v3.0 763
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Medicago truncatula RepID=Q2HTC9_MEDTR 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-ketoacyl-coa synthase family protein 1.364e-40
Internal
sp_v3.0_unigene124234 SustainPine v3.0 335
• AutoFact: 30S ribosomal protein S10 n=99 Tax=Staphylococcus RepID=RS10_STAA1 8.0e-17
• FL-Next: sp=30S ribosomal protein S10, chloroplastic; Guillardia theta (Cryptomonas phi). Plastid; Chloroplast. 0.0
N-terminus
sp_v3.0_unigene126821 SustainPine v3.0 1665
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 4.867e-31
Putative Complete
sp_v3.0_unigene126936 SustainPine v3.0 1486
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 1.4083e-42
Misassembled
sp_v3.0_unigene127017 SustainPine v3.0 1377
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 2.252e-36
C-terminus
sp_v3.0_unigene127848 SustainPine v3.0 1378
• AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 3.631e-36
C-terminus
sp_v3.0_unigene127997 SustainPine v3.0 1138
• AutoFact: 3-ketoacyl-CoA synthase n=7 Tax=Poaceae RepID=C5YVX8_SORBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-ketoacyl-coa synthase family protein 0.0
Complete
sp_v3.0_unigene128667 SustainPine v3.0 579
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 1.375e-33
Internal
sp_v3.0_unigene142282 SustainPine v3.0 741
• AutoFact: 3-ketoacyl-CoA synthase n=3 Tax=Andropogoneae RepID=C5XXY2_SORBI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 3.147e-25
Internal
sp_v3.0_unigene145049 SustainPine v3.0 453
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 3.0e-28
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 1.264e-25
C-terminus
sp_v3.0_unigene150300 SustainPine v3.0 255
• AutoFact: Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RTY5_OSTLU 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.267e-14
C-terminus
sp_v3.0_unigene150421 SustainPine v3.0 259
• AutoFact: Ribosomal protein S20 (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01D50_OSTTA 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.148e-14
C-terminus
sp_v3.0_unigene150610 SustainPine v3.0 260
• AutoFact: 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_190089.2| 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_001078781.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] sp|P49200.2|RS201_ARATH RecName: Full=40S ribosomal protein S20-1 9.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.267e-14
Putative C-terminus
sp_v3.0_unigene150651 SustainPine v3.0 343
• AutoFact: Putative ribosomal protein S20 n=1 Tax=Barentsia elongata RepID=A8UAG4_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain