Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Target SNARE coiled-coil domain

Term: IPR000727  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene57546 SustainPine v3.0 247
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R2N6_ORYSJ 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.329e-12
Putative Complete
sp_v3.0_unigene58633 SustainPine v3.0 255
AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Ginkgo biloba RepID=Q9ARL0_GINBI 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene59205 SustainPine v3.0 378
AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene59603 SustainPine v3.0 316
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.142e-25
Putative Complete
sp_v3.0_unigene60802 SustainPine v3.0 117
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61349 SustainPine v3.0 327
AutoFact: Unassigned protein
FL-Next: tr=Disease resistance protein; pekinensis). 0.0
Sma3: Polyprotein 7.125e-14
Internal
sp_v3.0_unigene63287 SustainPine v3.0 137
AutoFact: Syntaxin, plant, putative n=1 Tax=Ricinus communis RepID=B9RGU3_RICCO 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene64622 SustainPine v3.0 265
AutoFact: Syntaxin, plant, putative n=1 Tax=Ricinus communis RepID=B9S229_RICCO 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Qa-SNARE, SYP2/Pep12p/Syntaxin 7-type 2.487e-12
Internal
sp_v3.0_unigene66038 SustainPine v3.0 407
AutoFact: pfam00847, AP2, AP2 domain 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene66467 SustainPine v3.0 418
AutoFact: Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI000161FEA5 8.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene68705 SustainPine v3.0 226
AutoFact: pfam09177, Syntaxin-6_N, Syntaxin 6, N-terminal 6.0e-11
FL-Next: sp=Syntaxin-61; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene69735 SustainPine v3.0 180
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Syntaxin, putative 4.541e-08
Putative C-terminus
sp_v3.0_unigene70995 SustainPine v3.0 302
AutoFact: auxin influx protein [Populus tomentosa] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin influx carrier component 1.611e-29
Internal
sp_v3.0_unigene74265 SustainPine v3.0 375
AutoFact: Synaptosomal associated protein, putative n=1 Tax=Ricinus communis RepID=B9RLS5_RICCO 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75824 SustainPine v3.0 322
AutoFact: DUF3795 domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene77114 SustainPine v3.0 215
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene77487 SustainPine v3.0 378
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA5_POPTR 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 2.832e-26
N-terminus
sp_v3.0_unigene79175 SustainPine v3.0 404
AutoFact: Integral membrane protein sed5, putative n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6RCI4_CRYGW 1.0e-33
FL-Next: sp=Syntaxin-32; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Syntaxin 32 6.271e-09
C-terminus
sp_v3.0_unigene79363 SustainPine v3.0 398
AutoFact: Novel plant SNARE 12 [Arabidopsis thaliana] sp|Q9LNH6.1|NPS12_ARATH RecName: Full=Novel plant SNARE 12; Short=AtNPSN12 gb|AAF79516.1|AC023673_4 F21D18.4 [Arabidopsis thaliana] gb|AAL92119.1|AF487545_1 NPSN12 [Arabidopsis thaliana] dbj|BAC41993.1| unknown 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Novel plant SNARE 11 3.906e-13
C-terminus
sp_v3.0_unigene80236 SustainPine v3.0 114
AutoFact: Unassigned protein 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain