Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Zinc finger, TFIIS-type

Term: IPR001222  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1207 SustainPine v3.0 1108
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor S-II family protein, expressed 8.772e-06
Complete
sp_v3.0_unigene1616 SustainPine v3.0 1556
AutoFact: putative elongation factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription elongation factor s-II, putative 2.822e-11
Complete
sp_v3.0_unigene3138 SustainPine v3.0 1188
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene10690 SustainPine v3.0 1777
AutoFact: putative elongation factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13215 SustainPine v3.0 1000
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18587 SustainPine v3.0 1028
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene22796 SustainPine v3.0 1074
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase subunit 1.984e-12
Complete
sp_v3.0_unigene26737 SustainPine v3.0 215
AutoFact: DNA-directed RNA polymerase subunit n=7 Tax=Embryophyta RepID=Q2QNM4_ORYSJ 2.0e-27
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Sma3: DNA-directed RNA polymerase II 14.5 kDa polypeptide 4.89e-08
Internal
sp_v3.0_unigene27748 SustainPine v3.0 1794
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase subunit 1.984e-12
Complete
sp_v3.0_unigene31193 SustainPine v3.0 518
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 7.0e-06
FL-Next: sp=DNA-directed RNA polymerase subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: DNA-directed RNA polymerase, subunit C11/M/9 8.285e-06
C-terminus
sp_v3.0_unigene34385 SustainPine v3.0 1231
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 6.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor S-II family protein, expressed 8.772e-06
Complete
sp_v3.0_unigene41738 SustainPine v3.0 123
AutoFact: DNA-directed RNA polymerase subunit n=3 Tax=Poaceae RepID=C5YPS4_SORBI 5.0e-14
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Sma3: DNA-directed RNA polymerase II 14.5 kDa polypeptide 3.74e-08
Putative N-terminus
sp_v3.0_unigene75452 SustainPine v3.0 97
AutoFact: DNA-directed RNA polymerase subunit n=7 Tax=Embryophyta RepID=Q2QNM4_ORYSJ 2.0e-07
FL-Next: tr=Putative uncharacterized protein Sb05g026420; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: DNA-directed RNA polymerase II 14.5 kDa polypeptide 3.448e-08
Internal
sp_v3.0_unigene79110 SustainPine v3.0 433
AutoFact: DNA-directed RNA polymerase subunit n=3 Tax=Andropogoneae RepID=C5YC89_SORBI 2.0e-16
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Sma3: DNA-directed RNA polymerase II 14.5 kDa polypeptide 4.49e-08
Putative N-terminus
sp_v3.0_unigene143311 SustainPine v3.0 515
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene144395 SustainPine v3.0 477
AutoFact: Unassigned protein 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene144890 SustainPine v3.0 424
AutoFact: DNA-directed RNA polymerase subunit n=3 Tax=Andropogoneae RepID=C5YC89_SORBI 1.4013e-45
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene151493 SustainPine v3.0 387
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 2.0e-29
FL-Next: sp=DNA-directed RNA polymerase subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Putative Complete
sp_v3.0_unigene151752 SustainPine v3.0 370
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 1.0e-23
FL-Next: sp=DNA-directed RNA polymerase subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: DNA-directed RNA polymerase II 14.5 kDa polypeptide 2.847e-12
N-terminus
sp_v3.0_unigene152267 SustainPine v3.0 539
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Phytophthora infestans T30-4 RepID=D0NTV1_PHYIT 5.0e-30
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain