Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, TFIIS-type

Term: IPR001222  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene153028 SustainPine v3.0 404
AutoFact: RNA polymerase II core subunit n=1 Tax=Polysphondylium pallidum RepID=D3BKZ5_POLPA 1.0e-29
FL-Next: sp=DNA-directed RNA polymerase subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase II 14.5 kDa polypeptide 4.565e-12
Putative Complete
sp_v3.0_unigene154104 SustainPine v3.0 470
AutoFact: DNA-directed RNA polymerase II subunit RPB9 n=15 Tax=Diptera RepID=RPB9_DROME 7.0e-26
FL-Next: sp=DNA-directed RNA polymerase subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: At3g16980 5.361e-06
Complete
sp_v3.0_unigene155309 SustainPine v3.0 470
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Ixodes scapularis RepID=B7PRG9_IXOSC 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase II 14.5 kDa polypeptide 2.847e-12
Complete
sp_v3.0_unigene155770 SustainPine v3.0 483
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Phytophthora infestans T30-4 RepID=D0NTV1_PHYIT 3.0e-30
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene156201 SustainPine v3.0 534
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Phytophthora infestans T30-4 RepID=D0NTV1_PHYIT 9.0e-31
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene159382 SustainPine v3.0 170
AutoFact: putative elongation factor (ISS) [Ostreococcus tauri] emb|CAL56002.1| putative elongation factor (ISS) [Ostreococcus tauri] 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene166173 SustainPine v3.0 462
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Phaeosphaeria nodorum SN15 RepID=Q0U901_PHANO 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene183277 SustainPine v3.0 454
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene186994 SustainPine v3.0 326
AutoFact: DNA-directed RNA polymerase subunit n=3 Tax=Andropogoneae RepID=C5YC89_SORBI 6.0e-06
FL-Next: sp=DNA-directed RNA polymerase subunit; Selaginella moellendorffii (Spikemoss). 0.0
Putative N-terminus
sp_v3.0_unigene188519 SustainPine v3.0 775
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene198236 SustainPine v3.0 544
AutoFact: transcription elongation factor TFIIS [Schizosaccharomyces pombe 972h-] sp|P49373.1|TFS2_SCHPO RecName: Full=Transcription elongation factor S-II; AltName: Full=TFIIS gb|AAA74048.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe] emb|CAC 9.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene206417 SustainPine v3.0 548
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 4.0e-26
FL-Next: sp=DNA-directed RNA polymerase subunit; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Transcription factor S-II family protein, expressed 7.797e-06
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain