Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S2, conserved site

Term: IPR018130  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene30 SustainPine v3.0 2170
AutoFact: pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucan endo-1,3-beta-glucosidase, putative 6.99e-14
C-terminus
sp_v3.0_unigene94 SustainPine v3.0 2399
AutoFact: tryptophan aminotransferase related 2 [Arabidopsis thaliana] ref|NP_974608.1| tryptophan aminotransferase related 2 [Arabidopsis thaliana] gb|AAK92714.1| putative alliin lyase [Arabidopsis thaliana] gb|AAM14394.1| putative alliin lyase [Arabidopsis thalia 0.0
FL-Next: sp=Tryptophan aminotransferase-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_213, whole genome shotgun sequence 3.302e-19
Complete
sp_v3.0_unigene262 SustainPine v3.0 778
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 super family 1.757e-18
Putative N-terminus
sp_v3.0_unigene291 SustainPine v3.0 799
AutoFact: Oligopeptide transporter, putative n=1 Tax=Ricinus communis RepID=B9SA63_RICCO 0.0
FL-Next: sp=Oligopeptide transporter 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Oligopeptide transporter OPT family 4.976e-31
C-terminus
sp_v3.0_unigene394 SustainPine v3.0 2851
AutoFact: oligopeptide transporter OPT family protein [Musa acuminata] 0.0
FL-Next: sp=Oligopeptide transporter 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Oligopeptide transporter OPT family 1.292e-30
Complete
sp_v3.0_unigene557 SustainPine v3.0 937
AutoFact: Oligopeptide transporter 9 n=2 Tax=Zea mays RepID=B6SVF4_MAIZE 0.0
FL-Next: sp=Oligopeptide transporter 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Oligopeptide transporter OPT family 5.682e-31
C-terminus
sp_v3.0_unigene759 SustainPine v3.0 1985
AutoFact: Elongation factor 1-gamma n=1 Tax=Prunus avium RepID=EF1G_PRUAV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene820 SustainPine v3.0 2093
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 2.0e-13
FL-Next: sp=Putative E3 ubiquitin-protein ligase RF298; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene1735 SustainPine v3.0 2489
AutoFact: Cationic amino acid transporter, putative n=1 Tax=Ricinus communis RepID=B9RD13_RICCO 0.0
FL-Next: sp=Cationic amino acid transporter 9, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cationic amino acid transporter, putative 2.428e-07
Complete
sp_v3.0_unigene1919 SustainPine v3.0 1022
AutoFact: Multidrug resistance-associated protein 2 (Fragment) n=1 Tax=Phaseolus vulgaris RepID=E3Q0A8_PHAVU 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug resistance protein ABC transporter family 3.64338e-44
Internal
sp_v3.0_unigene2324 SustainPine v3.0 2135
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SED3_RICCO 0.0
FL-Next: sp=Tryptophan aminotransferase-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Alliinase 1.072e-20
Complete
sp_v3.0_unigene2531 SustainPine v3.0 2694
AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9IPU4_POPTR 0.0
FL-Next: tr=Cationic amino acid transporter; subsp. trichocarpa). 0.0
Sma3: Putative cationic amino acid transporter 1.66e-11
Complete
sp_v3.0_unigene2556 SustainPine v3.0 1319
AutoFact: ATP-binding cassette transporter, subfamily C, member 4, SmABCC4 n=2 Tax=Selaginella moellendorffii RepID=D8RHJ5_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance protein ABC transporter family 0.0
Complete
sp_v3.0_unigene2772 SustainPine v3.0 1891
AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] emb|CAB79765.1| cinnamoyl-CoA reductase-like protein [Arabidopsis thaliana] gb|AAK68826.1| cinnamoyl-CoA reductase-like protein [Arabidopsis thaliana] gb|AAN65066.1| cinnamoyl-C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2891 SustainPine v3.0 2465
AutoFact: glucan endo-1,3-beta-glucosidase 13 [Arabidopsis thaliana] sp|Q9FJU9.1|E1313_ARATH RecName: Full=Glucan endo-1,3-beta-glucosidase 13; AltName: Full=(1->3)-beta-glucan endohydrolase 13; Short=(1->3)-beta-glucanase 13; AltName: Full=Beta-1,3-endoglucanase 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucan endo-1,3-beta-glucosidase, putative 0.0
Complete
sp_v3.0_unigene3095 SustainPine v3.0 2640
AutoFact: Oligopeptide transporter 9 n=2 Tax=Zea mays RepID=B6SVF4_MAIZE 0.0
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Sma3: Oligopeptide transporter OPT family 1.372e-30
Complete
sp_v3.0_unigene3542 SustainPine v3.0 1455
AutoFact: NADPH quinone oxidoreductase-like protein [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3740 SustainPine v3.0 2076
AutoFact: unc51-like kinase [Arabidopsis thaliana] gb|AAX12876.1| At2g37840 [Arabidopsis thaliana] gb|AEC09456.1| unc51-like kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-protein kinase, putative 1.023e-06
Complete
sp_v3.0_unigene3755 SustainPine v3.0 2162
AutoFact: Emsy N Terminus and plant Tudor-like domain-containing protein [Arabidopsis thaliana] gb|AED91842.1| Emsy N Terminus and plant Tudor-like domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ENT domain containing protein 4.413e-12
Complete
sp_v3.0_unigene3895 SustainPine v3.0 1601
AutoFact: Putative 40S Ribosomal protein [Oryza sativa Japonica Group] gb|ABF94325.1| 40S ribosomal protein SA, putative, expressed [Oryza sativa Japonica Group] gb|EAZ25828.1| hypothetical protein OsJ_09668 [Oryza sativa Japonica Group] gb|ACJ54906.1| 40S ribosoma 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain