Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S2, conserved site

Term: IPR018130  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene142445 SustainPine v3.0 454
• AutoFact: Sugar carrier protein A n=6 Tax=Andropogoneae RepID=B6TMZ9_MAIZE 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sugar transporter, putative 2.167e-24
C-terminus
sp_v3.0_unigene142499 SustainPine v3.0 654
• AutoFact: putative prolyl endopeptidase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
• Sma3: Putative prolyl endopeptidase 6.349e-09
Putative C-terminus
sp_v3.0_unigene142836 SustainPine v3.0 348
• AutoFact: Coatomer subunit epsilon-1 n=7 Tax=Poaceae RepID=COPE1_ORYSJ 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Epsilon1-COP 1.501e-09
Misassembled
sp_v3.0_unigene142956 SustainPine v3.0 536
• AutoFact: 40S ribosomal protein SA n=2 Tax=Vitis vinifera RepID=RSSA_VITVI 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 2.883e-36
Internal
sp_v3.0_unigene143345 SustainPine v3.0 501
• AutoFact: Elongation factor 1-gamma 3 n=4 Tax=Andropogoneae RepID=B6T7G7_MAIZE 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-gamma 2.228e-12
C-terminus
sp_v3.0_unigene143376 SustainPine v3.0 349
• AutoFact: putative hexose transporter [Vitis vinifera] 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sugar transporter, putative 9.44797e-41
Putative C-terminus
sp_v3.0_unigene143508 SustainPine v3.0 292
• AutoFact: Oxygen-evolving enhancer protein 2, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBP_FRIAG 8.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE2 1.60028e-42
Internal
sp_v3.0_unigene143554 SustainPine v3.0 417
• AutoFact: glucose transporter [Saccharum hybrid cultivar H65-7052] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sugar transporter, putative 5.398e-27
Internal
sp_v3.0_unigene143812 SustainPine v3.0 524
unknown
sp_v3.0_unigene144197 SustainPine v3.0 454
• AutoFact: Hexose transporter protein n=2 Tax=Solanum lycopersicum RepID=O82000_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sugar transporter, putative 7.447e-38
Putative C-terminus
sp_v3.0_unigene144868 SustainPine v3.0 560
• AutoFact: coatomer subunit epsilon-1 [Arabidopsis thaliana] sp|Q9SA78.1|COPE1_ARATH RecName: Full=Coatomer subunit epsilon-1; AltName: Full=Epsilon-coat protein 1; Short=Epsilon-COP 1 gb|AAD25750.1|AC007060_8 Strong similarity to F19I3.7 gi|3033380 putative coatome 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Epsilon1-COP 1.351e-08
Putative N-terminus
sp_v3.0_unigene145289 SustainPine v3.0 478
• AutoFact: H+-transporting ATPase-like protein [Arabidopsis thaliana] 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plasma membrane H+-ATPase 1.631e-09
Internal
sp_v3.0_unigene145711 SustainPine v3.0 813
• AutoFact: O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] gb|AEC05971.1| O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glucan endo-1,3-beta-glucosidase, putative 2.991e-36
Internal
sp_v3.0_unigene148212 SustainPine v3.0 366
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 7.437e-12
Internal
sp_v3.0_unigene148536 SustainPine v3.0 327
• AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 8.601e-14
Internal
sp_v3.0_unigene148929 SustainPine v3.0 333
• AutoFact: ubiquitin-protein ligase [Arabidopsis thaliana] gb|AEC09245.1| ubiquitin-protein ligase [Arabidopsis thaliana] 2.0e-26
• FL-Next: sp=BTB/POZ domain-containing protein FBL11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene149357 SustainPine v3.0 214
• AutoFact: Aluminum activated citrate transporter n=5 Tax=Triticeae RepID=C0J4I6_SECCE 4.0e-12
• FL-Next: Isoform 2 of MATE efflux family protein 1 OS=Arabidopsis thaliana GN=MATE 0.0
• Sma3: DNA-damage-inducible protein f, putative 7.612e-18
Internal
sp_v3.0_unigene149559 SustainPine v3.0 190
• AutoFact: pfam03169, OPT, OPT oligopeptide transporter protein 2.0e-23
• FL-Next: sp=Oligopeptide transporter 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Oligopeptide transporter OPT family 4.351e-31
Internal
sp_v3.0_unigene149957 SustainPine v3.0 287
• AutoFact: pfam03169, OPT, OPT oligopeptide transporter protein 4.0e-13
• FL-Next: sp=Oligopeptide transporter 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Oligopeptide transporter, putative 1.576e-21
Internal
sp_v3.0_unigene150352 SustainPine v3.0 387
• AutoFact: PREDICTED: similar to ATP-binding cassette transporter 13, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155C0B8 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain