Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S2, conserved site

Term: IPR018130  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene120690 SustainPine v3.0 587
• AutoFact: ABC transporter C family member 5 n=4 Tax=Arabidopsis RepID=AB5C_ARATH 2.0e-39
• FL-Next: sp=ABC transporter C family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 2.896e-13
Internal
sp_v3.0_unigene120980 SustainPine v3.0 221
• AutoFact: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9T8Y6_RICCO 1.0e-24
• FL-Next: sp=ABC transporter C family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 6.946e-31
Internal
sp_v3.0_unigene121930 SustainPine v3.0 350
• AutoFact: DEAD-like helicase domain-containing protein [Arabidopsis thaliana] ref|NP_001184938.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] ref|NP_001184939.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] gb|AEE28314 3.0e-37
• FL-Next: sp=DNA repair and recombination protein RAD54; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene122869 SustainPine v3.0 609
• AutoFact: Oligopeptide transporter OPT family n=1 Tax=Populus trichocarpa RepID=B9GXV8_POPTR 0.0
• FL-Next: sp=Oligopeptide transporter 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Oligopeptide transporter OPT family 2.875e-31
Internal
sp_v3.0_unigene122913 SustainPine v3.0 256
• AutoFact: Oligopeptide transporter OPT family n=1 Tax=Populus trichocarpa RepID=B9GXV8_POPTR 4.0e-26
• FL-Next: sp=Oligopeptide transporter 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Oligopeptide transporter OPT family 1.551e-18
Internal
sp_v3.0_unigene124040 SustainPine v3.0 390
• AutoFact: Autoinhibited H+ ATPase n=9 Tax=rosids RepID=B9ILW8_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plasma membrane H+-ATPase 0.0
Internal
sp_v3.0_unigene124715 SustainPine v3.0 163
• AutoFact: Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 n=5 Tax=Populus RepID=B9H8C3_POPTR 5.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sulfate transporter 1.667e-39
Internal
sp_v3.0_unigene124725 SustainPine v3.0 285
• AutoFact: unc51-like kinase [Arabidopsis thaliana] gb|AAX12876.1| At2g37840 [Arabidopsis thaliana] gb|AEC09456.1| unc51-like kinase [Arabidopsis thaliana] 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase, putative 7.435e-10
Internal
sp_v3.0_unigene125017 SustainPine v3.0 250
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_222, whole genome shotgun sequence 5.848e-14
Internal
sp_v3.0_unigene125353 SustainPine v3.0 306
• AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9GJX7_POPTR 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Internal
sp_v3.0_unigene125786 SustainPine v3.0 362
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 4.09e-10
Internal
sp_v3.0_unigene126057 SustainPine v3.0 146
• AutoFact: putative cinnamoyl-CoA reductase [Oryza sativa Japonica Group] 9.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene126729 SustainPine v3.0 1505
• AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] emb|CAB79765.1| cinnamoyl-CoA reductase-like protein [Arabidopsis thaliana] gb|AAK68826.1| cinnamoyl-CoA reductase-like protein [Arabidopsis thaliana] gb|AAN65066.1| cinnamoyl-C 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene126749 SustainPine v3.0 1089
• AutoFact: cinnamoyl-CoA reductase-like protein [Arabidopsis thaliana] 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene126786 SustainPine v3.0 1763
• AutoFact: Elongation factor 1-gamma n=1 Tax=Prunus avium RepID=EF1G_PRUAV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene126838 SustainPine v3.0 456
• AutoFact: Cinnamoyl-CoA reductase-like protein n=4 Tax=Brassicaceae RepID=Q8LEH3_ARATH 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene126911 SustainPine v3.0 1206
• AutoFact: Putative glucan-endo-1,3-beta-glucosidase (Fragment) n=1 Tax=Pinus pinaster RepID=A4FT65_PINPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative beta-1,3-glucanase 4.545e-33
C-terminus
sp_v3.0_unigene127024 SustainPine v3.0 733
• AutoFact: RecName: Full=Elongation factor 1-gamma 2; Short=EF-1-gamma 2; AltName: Full=eEF-1B gamma 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-gamma 2.541e-12
C-terminus
sp_v3.0_unigene127238 SustainPine v3.0 1183
• AutoFact: putative cinnamoyl-CoA reductase [Oryza sativa Japonica Group] 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cinnamoyl-CoA reductase, putative 6.524e-07
N-terminus
sp_v3.0_unigene127491 SustainPine v3.0 2201
• AutoFact: MATE efflux family protein [Arabidopsis thaliana] sp|Q84K71.1|MATE2_ARATH RecName: Full=MATE efflux family protein 2, chloroplastic; AltName: Full=Protein DTX44; Flags: Precursor gb|AAO42040.1| unknown protein [Arabidopsis thaliana] gb|AAO63941.1| unknown 0.0
• FL-Next: sp=MATE efflux family protein 3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-damage-inducible protein f, putative 8.319e-25
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain