Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L22/L17, conserved site

Term: IPR018260  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene64050 SustainPine v3.0 195
AutoFact: peptidase family-like protein [Oryza sativa Japonica Group] dbj|BAD32061.1| peptidase family-like protein [Oryza sativa Japonica Group] 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene64669 SustainPine v3.0 150
AutoFact: Unassigned protein 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene71389 SustainPine v3.0 354
AutoFact: Potassium channel KOR1 n=3 Tax=Oryza sativa RepID=KOR1_ORYSJ 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene76324 SustainPine v3.0 203
AutoFact: Putative 60S ribosomal protein RPL17 (Fragment) n=1 Tax=Flustra foliacea RepID=A9UDS6_9BILA 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L17-2 1.165e-08
Internal
sp_v3.0_unigene78234 SustainPine v3.0 352
AutoFact: 60S ribosomal protein L17 n=5 Tax=Apocrita RepID=E2ABF3_9HYME 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L17-2 2.379e-08
Putative C-terminus
sp_v3.0_unigene80319 SustainPine v3.0 427
AutoFact: Ribosomal protein L17 n=2 Tax=Branchiostoma RepID=Q6WN59_BRABE 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L17-2 2.13e-08
C-terminus
sp_v3.0_unigene80765 SustainPine v3.0 286
AutoFact: Ribosomal petrp-like protein n=2 Tax=asterids RepID=F4YF96_CAMSI 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L17-2 1.699e-08
Putative N-terminus
sp_v3.0_unigene95430 SustainPine v3.0 655
AutoFact: Unassigned protein
FL-Next: sp=Helicase protein MOM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 2.66e-07
Internal
sp_v3.0_unigene105399 SustainPine v3.0 418
AutoFact: peptidase 3.0e-32
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene116230 SustainPine v3.0 616
AutoFact: ribosomal protein [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene121782 SustainPine v3.0 191
AutoFact: Potassium channel TORK1 n=1 Tax=Nicotiana tabacum RepID=Q5NT78_TOBAC 7.0e-21
FL-Next: sp=Potassium channel KOR1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene124235 SustainPine v3.0 308
AutoFact: Outwardly rectifying potassium channel n=1 Tax=Samanea saman RepID=Q9FS92_SAMSA 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene137427 SustainPine v3.0 311
AutoFact: ClpC protease [Spinacia oleracea] 1.0e-32
FL-Next: sp=Chaperone protein ClpC1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: ATP-dependent Clp protease ATP-binding subunit clpA homolog 1.505e-13
Internal
sp_v3.0_unigene144778 SustainPine v3.0 602
AutoFact: ribosomal protein L17-1 [Poa secunda] 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S29 2.935e-20
Complete
sp_v3.0_unigene145010 SustainPine v3.0 389
AutoFact: ribosomal protein L17-1 [Poa secunda] 2.0e-28
FL-Next: sp=60S ribosomal protein L17-2; Hordeum vulgare (Barley). 0.0
Sma3: 60S ribosomal protein L17-2 2.145e-08
C-terminus
sp_v3.0_unigene145207 SustainPine v3.0 523
AutoFact: Ribosomal petrp-like protein n=2 Tax=asterids RepID=F4YF96_CAMSI 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L17-2 2.159e-08
Misassembled
sp_v3.0_unigene150221 SustainPine v3.0 473
AutoFact: 60S ribosomal protein L17-2 n=1 Tax=Phytophthora infestans T30-4 RepID=D0N014_PHYIT 8.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L17-2 2.074e-08
C-terminus
sp_v3.0_unigene150500 SustainPine v3.0 455
AutoFact: 60S ribosomal protein L17 n=1 Tax=Dictyostelium discoideum RepID=RL17_DICDI 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L17 1.39e-10
Putative N-terminus
sp_v3.0_unigene150564 SustainPine v3.0 132
AutoFact: 60S ribosomal protein L17 (Fragment) n=1 Tax=Scenedesmus obliquus RepID=E3SC74_SCEOB 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L17-2 1.922e-08
Internal
sp_v3.0_unigene150566 SustainPine v3.0 318
AutoFact: Ribosomal protein L17 (Fragment) n=1 Tax=Myxine glutinosa RepID=Q86LY9_MYXGL 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L17-2 2.145e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain