Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Root cap

Term: IPR009646  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene83367 SustainPine v3.0 294
AutoFact: Drf_FH1 multi-domain protein 2.0e-14
Sma3: Extensin 1.357e-22
coding
sp_v3.0_unigene83369 SustainPine v3.0 302
AutoFact: Drf_FH1 multi-domain protein 3.0e-13
Sma3: Proline-rich protein 3.074e-17
coding
sp_v3.0_unigene84250 SustainPine v3.0 252
AutoFact: Extensin_2 multi-domain protein 4.0e-13
Sma3: Extensin 4.237e-06
coding
sp_v3.0_unigene84336 SustainPine v3.0 236
AutoFact: Extensin_2 multi-domain protein 8.0e-16
Sma3: Extensin (Class I) 2.545e-15
coding
sp_v3.0_unigene85990 SustainPine v3.0 427
AutoFact: Gly_rich multi-domain protein 2.0e-14
Sma3: Putative glycine-rich cell wall structural protein 3.803e-12
coding
sp_v3.0_unigene86147 SustainPine v3.0 265
AutoFact: Extensin_2 multi-domain protein 6.0e-13
Sma3: Extensin 1.555e-24
coding
sp_v3.0_unigene86832 SustainPine v3.0 410
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7U598_VITVI 6.0e-07
Sma3: Extensin 3.391e-22
coding
sp_v3.0_unigene94027 SustainPine v3.0 588
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 7.0e-26
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
sp_v3.0_unigene94082 SustainPine v3.0 911
AutoFact: late embryogenesis abundant protein-like protein [Arabidopsis thaliana] dbj|BAB10109.1| root cap protein 2-like protein [Arabidopsis thaliana] gb|AAZ23915.1| At5g54370 [Arabidopsis thaliana] gb|AED96489.1| late embryogenesis abundant protein-like protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Structural constituent of cell wall, putative 7.661e-18
C-terminus
sp_v3.0_unigene98216 SustainPine v3.0 321
AutoFact: Extensin_2 multi-domain protein 6.0e-17
Sma3: Extensin 1.955e-18
coding
sp_v3.0_unigene101642 SustainPine v3.0 483
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 0.0
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Root cap protein 2 1.308e-08
Internal
sp_v3.0_unigene102081 SustainPine v3.0 541
AutoFact: late embryogenesis abundant protein-like protein [Arabidopsis thaliana] dbj|BAB10109.1| root cap protein 2-like protein [Arabidopsis thaliana] gb|AAZ23915.1| At5g54370 [Arabidopsis thaliana] gb|AED96489.1| late embryogenesis abundant protein-like protein 3.0e-21
FL-Next: tr=Putative uncharacterized protein Sb67; Picea mariana (Black spruce) (Abies mariana). 0.0
Sma3: Putative uncharacterized protein Sb67 0.0
Putative Complete
sp_v3.0_unigene103375 SustainPine v3.0 412
AutoFact: late embryogenesis abundant protein-like protein [Arabidopsis thaliana] dbj|BAB08236.1| unnamed protein product [Arabidopsis thaliana] gb|AAN18167.1| At5g60530/muf9_180 [Arabidopsis thaliana] gb|AED97340.1| late embryogenesis abundant protein-like protein 1.0e-20
FL-Next: tr=At5g60530/muf9_180; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: At5g60530/muf9_180 9.747e-06
Internal
sp_v3.0_unigene114598 SustainPine v3.0 731
AutoFact: late embryogenesis abundant protein-like protein [Arabidopsis thaliana] dbj|BAB10109.1| root cap protein 2-like protein [Arabidopsis thaliana] gb|AAZ23915.1| At5g54370 [Arabidopsis thaliana] gb|AED96489.1| late embryogenesis abundant protein-like protein 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Structural constituent of cell wall, putative 5.861e-11
C-terminus
sp_v3.0_unigene123534 SustainPine v3.0 374
AutoFact: Late embryogenesis abundant protein-like protein n=1 Tax=Arabidopsis thaliana RepID=O81843_ARATH 6.0e-07
FL-Next: tr=Late embryogenesis abundant protein-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Structural constituent of cell wall, putative 7.78e-10
Internal
sp_v3.0_unigene127096 SustainPine v3.0 577
AutoFact: Extensin_2 multi-domain protein 1.0e-24
Sma3: Extensin 0.0
coding
sp_v3.0_unigene127519 SustainPine v3.0 1124
AutoFact: proteophosphoglycan 5 [Leishmania major strain Friedlin] emb|CBZ12682.1| proteophosphoglycan 5 [Leishmania major strain Friedlin] 5.0e-06
Sma3: Extensin-like protein 9.664e-11
coding
sp_v3.0_unigene131132 SustainPine v3.0 229
AutoFact: Late embryogenesis abundant-like protein (Fragment) n=19 Tax=Picea sitchensis RepID=E0ZAL6_PICSI 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene132429 SustainPine v3.0 473
AutoFact: Extensin_2 multi-domain protein 4.0e-23
Sma3: Extensin 0.0
coding
sp_v3.0_unigene135034 SustainPine v3.0 367
AutoFact: Unassigned protein 8.0e-08
FL-Next: tr=Putative uncharacterized protein Sb67; Picea mariana (Black spruce) (Abies mariana). 0.0
Sma3: Putative uncharacterized protein Sb67 1.462e-06
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain