Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Root cap

Term: IPR009646  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene21488 SustainPine v3.0 999
AutoFact: Drf_FH1 multi-domain protein 5.0e-18
Sma3: Extensin 9.397e-29
coding
sp_v3.0_unigene21502 SustainPine v3.0 792
AutoFact: proteophosphoglycan ppg4 [Leishmania braziliensis MHOM/BR/75/M2904] emb|CAM43270.1| proteophosphoglycan ppg4 [Leishmania braziliensis MHOM/BR/75/M2904] 2.0e-09
FL-Next: sp=Putative membrane protein ycf1; Cucumis sativus (Cucumber). Plastid; Chloroplast. 0.0
Sma3: Extensin 2.226e-24
Internal
sp_v3.0_unigene21513 SustainPine v3.0 603
AutoFact: Extensin_2 multi-domain protein 4.0e-23
Sma3: Extensin 0.0
coding
sp_v3.0_unigene22155 SustainPine v3.0 289
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 8.0e-35
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
N-terminus
sp_v3.0_unigene23782 SustainPine v3.0 1594
AutoFact: late embryogenesis abundant protein-like protein [Arabidopsis thaliana] dbj|BAB10109.1| root cap protein 2-like protein [Arabidopsis thaliana] gb|AAZ23915.1| At5g54370 [Arabidopsis thaliana] gb|AED96489.1| late embryogenesis abundant protein-like protein 0.0
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Structural constituent of cell wall, putative 5.02e-18
Complete
sp_v3.0_unigene24379 SustainPine v3.0 1239
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 0.0
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Structural constituent of cell wall, putative 1.701e-17
Complete
sp_v3.0_unigene25403 SustainPine v3.0 441
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 3.0e-07
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
sp_v3.0_unigene25473 SustainPine v3.0 348
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 9.99967e-42
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Structural constituent of cell wall, putative 4.005e-08
N-terminus
sp_v3.0_unigene27257 SustainPine v3.0 1253
AutoFact: PREDICTED: similar to Scale keratin (S-ker) (sKer) [Gallus gallus] 1.0e-05
FL-Next: tr=Os06g0316300 protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Extensin 0.0
Complete
sp_v3.0_unigene27364 SustainPine v3.0 424
AutoFact: Drf_FH1 multi-domain protein 7.0e-36
Sma3: Extensin-like protein 1.735e-19
coding
sp_v3.0_unigene27867 SustainPine v3.0 641
AutoFact: late embryogenesis abundant protein-like protein [Arabidopsis thaliana] dbj|BAB10109.1| root cap protein 2-like protein [Arabidopsis thaliana] gb|AAZ23915.1| At5g54370 [Arabidopsis thaliana] gb|AED96489.1| late embryogenesis abundant protein-like protein 2.0e-30
FL-Next: tr=Putative uncharacterized protein Sb67; Picea mariana (Black spruce) (Abies mariana). 0.0
Sma3: Structural constituent of cell wall, putative 1.824e-11
Complete
sp_v3.0_unigene28126 SustainPine v3.0 779
AutoFact: late embryogenesis abundant protein-like protein [Arabidopsis thaliana] dbj|BAB10109.1| root cap protein 2-like protein [Arabidopsis thaliana] gb|AAZ23915.1| At5g54370 [Arabidopsis thaliana] gb|AED96489.1| late embryogenesis abundant protein-like protein 4.0e-39
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Structural constituent of cell wall, putative 2.748e-11
C-terminus
sp_v3.0_unigene28352 SustainPine v3.0 925
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 0.0
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Similarity to root cap protein 4.622e-09
C-terminus
sp_v3.0_unigene29469 SustainPine v3.0 880
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 0.0
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Structural constituent of cell wall, putative 1.009e-10
C-terminus
sp_v3.0_unigene29668 SustainPine v3.0 961
AutoFact: Drf_FH1 multi-domain protein 5.0e-20
Sma3: Extensin 3.312e-31
coding
sp_v3.0_unigene30315 SustainPine v3.0 891
AutoFact: Drf_FH1 multi-domain protein 4.0e-21
Sma3: Extensin 0.0
coding
sp_v3.0_unigene31029 SustainPine v3.0 1017
AutoFact: DUF1421 multi-domain protein 2.0e-20
Sma3: Extensin 1.9e-10
coding
sp_v3.0_unigene31142 SustainPine v3.0 282
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 8.0e-33
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
N-terminus
sp_v3.0_unigene31910 SustainPine v3.0 442
AutoFact: Extensin_2 multi-domain protein 3.0e-21
Sma3: Extensin 0.0
coding
sp_v3.0_unigene32050 SustainPine v3.0 592
AutoFact: late embryogenesis abundant protein-like protein [Arabidopsis thaliana] dbj|BAB10109.1| root cap protein 2-like protein [Arabidopsis thaliana] gb|AAZ23915.1| At5g54370 [Arabidopsis thaliana] gb|AED96489.1| late embryogenesis abundant protein-like protein 3.0e-13
FL-Next: tr=Putative uncharacterized protein Sb67; Picea mariana (Black spruce) (Abies mariana). 0.0
Sma3: Root cap protein 2-like protein 5.361e-06
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain