Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Aminoacyl-tRNA synthetase, class Ic

Term: IPR002305  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1277 SustainPine v3.0 1690
AutoFact: putative tryptophanyl-tRNA synthetase [Oryza sativa Japonica Group] gb|EAY75781.1| hypothetical protein OsI_03697 [Oryza sativa Indica Group] gb|EAZ13498.1| hypothetical protein OsJ_03415 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene2727 SustainPine v3.0 2007
AutoFact: tryptophanyl-tRNA synthetase [Arabidopsis thaliana] ref|NP_001078104.1| tryptophanyl-tRNA synthetase [Arabidopsis thaliana] gb|AAF04890.1|AC011437_5 putative tryptophanyl-tRNA synthetase [Arabidopsis thaliana] gb|AAL85027.1| putative tryptophanyl-tRNA syn 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13625 SustainPine v3.0 745
AutoFact: Tryptophanyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RS09_RICCO 0.0
FL-Next: tr=Tryptophanyl-tRNA synthetase, putative; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene17889 SustainPine v3.0 2596
AutoFact: Tyrosyl-tRNA synthetase n=3 Tax=Zea mays RepID=B6T638_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative tyrosyl-tRNA synthetase 2.393e-15
Complete
sp_v3.0_unigene31025 SustainPine v3.0 402
AutoFact: Tyrosyl-tRNA synthetase [Nicotiana tabacum] 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tyrosyl-tRNA synthetase 1.14e-08
N-terminus
sp_v3.0_unigene39302 SustainPine v3.0 413
AutoFact: Tyrosyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RGT2_RICCO 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene43058 SustainPine v3.0 252
AutoFact: Tyrosyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RGT2_RICCO 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene44690 SustainPine v3.0 176
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Poaceae RepID=Q2QUR6_ORYSJ 2.0e-19
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 1.4e-30
Internal
sp_v3.0_unigene49458 SustainPine v3.0 512
AutoFact: Integrase (Fragment) n=1 Tax=Gossypium hirsutum RepID=Q7XYU1_GOSHI 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 5.766e-13
Putative Complete
sp_v3.0_unigene53481 SustainPine v3.0 441
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene53713 SustainPine v3.0 351
AutoFact: rve domain containing protein 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 4.752e-14
Putative Complete
sp_v3.0_unigene55392 SustainPine v3.0 223
AutoFact: RVT_1 domain containing protein 3.0e-05
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Gag-Pol polyprotein 1.208e-14
Putative C-terminus
sp_v3.0_unigene55622 SustainPine v3.0 154
AutoFact: Tyrosyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RGT2_RICCO 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene56267 SustainPine v3.0 340
AutoFact: Os09g0491900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0J0N1_ORYSJ 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 1.204e-11
C-terminus
sp_v3.0_unigene58093 SustainPine v3.0 367
AutoFact: tyrS tyrosyl-tRNA synthetase [Arabidopsis thaliana] gb|AAF32473.1| putative tyrosyl-tRNA synthetase [Arabidopsis thaliana] dbj|BAD95182.1| putative tyrosyl-tRNA synthetase [Arabidopsis thaliana] gb|ABK32110.1| At3g02660 [Arabidopsis thaliana] gb|AEE73845. 2.0e-40
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene58526 SustainPine v3.0 490
AutoFact: Os09g0491900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0J0N1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 2.805e-14
Putative Complete
sp_v3.0_unigene58684 SustainPine v3.0 346
AutoFact: rve domain containing protein 6.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 7.867e-14
Putative Complete
sp_v3.0_unigene58831 SustainPine v3.0 245
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 5.812e-15
C-terminus
sp_v3.0_unigene62195 SustainPine v3.0 234
AutoFact: OSJNBb0022F23.14 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XR16_ORYSJ 8.0e-16
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.558e-15
Putative C-terminus
sp_v3.0_unigene64077 SustainPine v3.0 264
AutoFact: tyrS tyrosyl-tRNA synthetase [Arabidopsis thaliana] gb|AAF32473.1| putative tyrosyl-tRNA synthetase [Arabidopsis thaliana] dbj|BAD95182.1| putative tyrosyl-tRNA synthetase [Arabidopsis thaliana] gb|ABK32110.1| At3g02660 [Arabidopsis thaliana] gb|AEE73845. 1.0e-26
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain