Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RmlC-like jelly roll fold

Term: IPR014710  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene167362 SustainPine v3.0 209
AutoFact: Unassigned protein 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167421 SustainPine v3.0 302
AutoFact: Unassigned protein 1.0e-18
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative N-terminus
sp_v3.0_unigene167452 SustainPine v3.0 242
AutoFact: cyclic nucleotide and calmodulin-regulated ion channel-like protein [Arabidopsis thaliana] 3.0e-30
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 3.565e-26
Internal
sp_v3.0_unigene167764 SustainPine v3.0 251
AutoFact: GK15001 gene product from transcript GK15001-RA 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene168050 SustainPine v3.0 357
AutoFact: Mannose-6-phosphate isomerase n=1 Tax=Picea sitchensis RepID=B8LLA2_PICSI 4.0e-10
FL-Next: sp=Mannose-6-phosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mannose-6-phosphate isomerase 7.426e-15
Internal
sp_v3.0_unigene169734 SustainPine v3.0 437
AutoFact: Caldesmon multi-domain protein 1.0e-19
coding
sp_v3.0_unigene169876 SustainPine v3.0 524
AutoFact: regulatory subunit of protein kinase A [Colletotrichum gloeosporioides] 3.0e-21
coding
sp_v3.0_unigene172497 SustainPine v3.0 395
AutoFact: Caldesmon multi-domain protein 3.0e-22
coding
sp_v3.0_unigene185832 SustainPine v3.0 291
AutoFact: Putative expansin-A17 n=2 Tax=Arabidopsis RepID=EXP17_ARATH 2.0e-20
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene187117 SustainPine v3.0 223
AutoFact: Unassigned protein 8.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene187343 SustainPine v3.0 476
AutoFact: Unassigned protein 5.0e-27
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene187695 SustainPine v3.0 372
AutoFact: cupin domain-containing protein [Arabidopsis thaliana] gb|AAF26784.1|AC016829_8 hypothetical protein [Arabidopsis thaliana] gb|AAQ89639.1| At3g04300 [Arabidopsis thaliana] dbj|BAD42883.1| unknown protein [Arabidopsis thaliana] gb|AEE74064.1| cupin domain- 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Enzyme of the cupin superfamily 1.17e-18
C-terminus
sp_v3.0_unigene188661 SustainPine v3.0 401
AutoFact: Expansin 1 n=1 Tax=Cunninghamia lanceolata RepID=A1E2V1_CUNLA 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene189063 SustainPine v3.0 611
AutoFact: cupin domain-containing protein [Arabidopsis thaliana] emb|CAB39783.1| putative protein [Arabidopsis thaliana] emb|CAB78153.1| putative protein [Arabidopsis thaliana] gb|ABK32147.1| At4g10300 [Arabidopsis thaliana] gb|AEE82865.1| cupin domain-containing p 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene189191 SustainPine v3.0 588
AutoFact: Chain A, Structure Of The Arabidopsis Thaliana Erv1 Thiol Oxidase pdb|2HJ3|B Chain B, Structure Of The Arabidopsis Thaliana Erv1 Thiol Oxidase 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene189579 SustainPine v3.0 482
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 6.503e-12
Internal
sp_v3.0_unigene196125 SustainPine v3.0 206
AutoFact: cupin domain-containing protein [Arabidopsis thaliana] gb|AAF26784.1|AC016829_8 hypothetical protein [Arabidopsis thaliana] gb|AAQ89639.1| At3g04300 [Arabidopsis thaliana] dbj|BAD42883.1| unknown protein [Arabidopsis thaliana] gb|AEE74064.1| cupin domain- 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Enzyme of the cupin superfamily 1.801e-13
C-terminus
sp_v3.0_unigene197239 SustainPine v3.0 347
AutoFact: Putative germin-like protein 3-2 n=2 Tax=Oryza sativa RepID=GL32_ORYSJ 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Germin-like protein 2.537e-29
C-terminus
sp_v3.0_unigene199004 SustainPine v3.0 448
AutoFact: RVT_2 domain containing protein 8.00001e-42
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene199445 SustainPine v3.0 526
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.465e-26
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain