Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RmlC-like jelly roll fold

Term: IPR014710  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene99919 SustainPine v3.0 534
• AutoFact: Vicilin-like storage protein n=1 Tax=Araucaria angustifolia RepID=Q8LKI7_9CONI 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene101407 SustainPine v3.0 940
• AutoFact: putative protein phosphatase 2C [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene101539 SustainPine v3.0 675
• AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9SIE1_RICCO 2.0e-40
• FL-Next: sp=Cyclic nucleotide-gated ion channel 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cyclic nucleotide-gated ion channel 2 6.561e-12
Internal
sp_v3.0_unigene101854 SustainPine v3.0 814
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cupin, RmlC-type 2.006e-08
Putative Complete
sp_v3.0_unigene102316 SustainPine v3.0 854
• AutoFact: putative protein phosphatase 2C [Arabidopsis thaliana] 4.0e-27
• FL-Next: sp=Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene102769 SustainPine v3.0 286
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene102832 SustainPine v3.0 385
• AutoFact: Copia LTR rider n=1 Tax=Solanum lycopersicum RepID=B1N668_SOLLC 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.503e-23
Internal
sp_v3.0_unigene103202 SustainPine v3.0 275
• AutoFact: RVT_2 domain containing protein 3.0e-05
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene103387 SustainPine v3.0 369
• AutoFact: Vicilin-like storage protein n=1 Tax=Araucaria angustifolia RepID=Q8LKI7_9CONI 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene104025 SustainPine v3.0 402
• AutoFact: Na+/H+ antiporter n=4 Tax=Oryza sativa RepID=Q5ICN3_ORYSJ 0.0
• FL-Next: sp=Sodium/hydrogen exchanger; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Na+/H+ antiporter 5.064e-12
Internal
sp_v3.0_unigene104026 SustainPine v3.0 331
• AutoFact: cyclic nucleotide gated channel 19 [Arabidopsis thaliana] sp|Q9LDR2.1|CNG19_ARATH RecName: Full=Putative cyclic nucleotide-gated ion channel 19; AltName: Full=Cyclic nucleotide-binding transporter 2 gb|AAF73129.1|AF148542_1 cyclic nucleotide-binding trans 6.0e-17
• FL-Next: sp=Putative cyclic nucleotide-gated ion channel 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 8.694e-06
Internal
sp_v3.0_unigene104339 SustainPine v3.0 283
• AutoFact: Potassium channel AKT2/3 n=2 Tax=Arabidopsis RepID=AKT2_ARATH 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potassium channel 1.809e-15
Internal
sp_v3.0_unigene104401 SustainPine v3.0 418
• AutoFact: Vicilin-like storage protein n=2 Tax=Picea glauca RepID=Q40844_PICGL 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene106351 SustainPine v3.0 306
• AutoFact: Sodium/hydrogen exchanger plant, putative n=1 Tax=Ricinus communis RepID=B9S7C8_RICCO 6.0e-33
• FL-Next: sp=Sodium/hydrogen exchanger 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative Na/H antiporter 2.278e-11
Internal
sp_v3.0_unigene106753 SustainPine v3.0 478
• AutoFact: rve domain containing protein 5.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 1.308e-06
Internal
sp_v3.0_unigene106757 SustainPine v3.0 255
• AutoFact: Potassium channel NKT1 n=1 Tax=Nicotiana tabacum RepID=Q5NT80_TOBAC 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative AKT1-like potassium channel 5.235e-08
Internal
sp_v3.0_unigene106897 SustainPine v3.0 391
• AutoFact: Inward rectifying shaker-like K+ channel n=4 Tax=Vitis vinifera RepID=D0R6Q1_VITVI 5.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Inwardly rectifying potassium channel subunit 6.609e-08
Internal
sp_v3.0_unigene107990 SustainPine v3.0 398
• AutoFact: Cyclic nucleotide gated channel n=1 Tax=Malus x domestica RepID=A9CRE4_MALDO 2.0e-37
• FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 4.901e-06
Internal
sp_v3.0_unigene110307 SustainPine v3.0 552
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.386e-17
Internal
sp_v3.0_unigene114266 SustainPine v3.0 276
• AutoFact: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 n=9 Tax=Poaceae RepID=ARD2_ORYSJ 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acireductone dioxygenase, putative 1.229e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain