Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Germin

Term: IPR001929  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene76376 SustainPine v3.0 328
AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Germin-like protein 1.156e-29
Internal
sp_v3.0_unigene76527 SustainPine v3.0 345
AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.405e-24
Internal
sp_v3.0_unigene77259 SustainPine v3.0 275
AutoFact: Germin-like protein 5-1 n=1 Tax=Oryza sativa Japonica Group RepID=GL51_ORYSJ 4.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene80134 SustainPine v3.0 165
AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA 4.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene93711 SustainPine v3.0 922
AutoFact: Germin-like protein 2 n=1 Tax=Vitis vinifera RepID=Q0MYQ7_VITVI 0.0
FL-Next: sp=Germin-like protein subfamily 2 member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Germin-like protein 7.5e-40
Complete
sp_v3.0_unigene96237 SustainPine v3.0 654
AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.953e-18
Internal
sp_v3.0_unigene98669 SustainPine v3.0 406
AutoFact: rve domain containing protein 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene102769 SustainPine v3.0 286
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene102832 SustainPine v3.0 385
AutoFact: Copia LTR rider n=1 Tax=Solanum lycopersicum RepID=B1N668_SOLLC 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.503e-23
Internal
sp_v3.0_unigene103202 SustainPine v3.0 275
AutoFact: RVT_2 domain containing protein 3.0e-05
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene106753 SustainPine v3.0 478
AutoFact: rve domain containing protein 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 1.308e-06
Internal
sp_v3.0_unigene110307 SustainPine v3.0 552
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.386e-17
Internal
sp_v3.0_unigene120686 SustainPine v3.0 463
AutoFact: rve domain containing protein 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene121041 SustainPine v3.0 461
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene122949 SustainPine v3.0 246
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 1.0e-28
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Reverse transcriptase-like protein 0.0
Internal
sp_v3.0_unigene126441 SustainPine v3.0 557
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 7.311e-11
Internal
sp_v3.0_unigene127750 SustainPine v3.0 698
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 1.302e-10
Putative C-terminus
sp_v3.0_unigene138451 SustainPine v3.0 522
AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rhicadhesin receptor, putative 1.723e-15
Putative C-terminus
sp_v3.0_unigene140403 SustainPine v3.0 603
AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA 3.0e-30
FL-Next: tr=Germin-like protein; Pinus caribaea. 0.0
Sma3: Germin-like protein 1.815e-07
C-terminus
sp_v3.0_unigene144203 SustainPine v3.0 518
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.284e-31
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain