Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Germin

Term: IPR001929  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene66419 SustainPine v3.0 358
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 1.0e-24
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.608e-16
Internal
sp_v3.0_unigene66640 SustainPine v3.0 351
AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Germin-like protein 4.475e-35
Internal
sp_v3.0_unigene66954 SustainPine v3.0 334
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.419e-18
Internal
sp_v3.0_unigene67143 SustainPine v3.0 363
AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative retroelement pol polyprotein 8.891e-09
Internal
sp_v3.0_unigene68323 SustainPine v3.0 321
AutoFact: RVT_2 domain containing protein 4.0e-25
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene68787 SustainPine v3.0 287
AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 1.0e-30
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.449e-11
Internal
sp_v3.0_unigene68842 SustainPine v3.0 290
AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA 4.0e-23
FL-Next: tr=Germin-like protein; Pinus caribaea. 0.0
Sma3: Germin-like protein 1.523e-17
Internal
sp_v3.0_unigene69449 SustainPine v3.0 189
AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Germin-like protein 2.72e-13
Internal
sp_v3.0_unigene69614 SustainPine v3.0 229
AutoFact: Rhicadhesin receptor, putative n=1 Tax=Ricinus communis RepID=B9RFS5_RICCO 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Germin-like protein 3.209e-10
Internal
sp_v3.0_unigene69921 SustainPine v3.0 395
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SJT2_ARATH 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.168e-15
Internal
sp_v3.0_unigene70096 SustainPine v3.0 199
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 3.0e-14
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene71558 SustainPine v3.0 363
AutoFact: Germin-like protein n=1 Tax=Chimonanthus praecox RepID=A7Y2G2_9MAGN 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene71618 SustainPine v3.0 325
AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA 1.0e-10
FL-Next: tr=Germin-like protein; Pinus caribaea. 0.0
Sma3: Germin-like protein 8.545e-08
C-terminus
sp_v3.0_unigene71711 SustainPine v3.0 152
AutoFact: Unassigned protein 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene72458 SustainPine v3.0 311
AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA 4.0e-23
FL-Next: tr=Germin-like protein; Pinus caribaea. 0.0
Sma3: Germin-like protein 1.815e-07
Putative C-terminus
sp_v3.0_unigene72816 SustainPine v3.0 138
AutoFact: Rhicadhesin receptor, putative n=1 Tax=Ricinus communis RepID=B9T180_RICCO 4.0e-08
FL-Next: sp=Putative germin-like protein 8-1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Germin-like protein 2.413e-07
Internal
sp_v3.0_unigene73404 SustainPine v3.0 94
AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA 5.0e-06
FL-Next: tr=Germin-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Germin-like protein 7.595e-08
N-terminus
sp_v3.0_unigene73889 SustainPine v3.0 417
AutoFact: Sphingolipid fatty acid alpha hydroxylase n=1 Tax=Ricinus communis RepID=B9SB09_RICCO 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene74378 SustainPine v3.0 457
AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.661e-11
Internal
sp_v3.0_unigene75468 SustainPine v3.0 297
AutoFact: germin-like protein 5a [Hordeum vulgare subsp. vulgare] 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Germin-like protein 2.05991e-43
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain