Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene57344
|
SustainPine v3.0
|
210
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
4.0e-14
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Copia-type polyprotein
|
1.015e-07
|
|
Internal
|
sp_v3.0_unigene57409
|
SustainPine v3.0
|
458
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
1.0e-37
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.023e-16
|
|
Internal
|
sp_v3.0_unigene57769
|
SustainPine v3.0
|
357
|
• AutoFact: RVT_2 domain containing protein
|
8.0e-37
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
5.397e-15
|
|
Internal
|
sp_v3.0_unigene57829
|
SustainPine v3.0
|
287
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
3.0e-13
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Gag-Pol polyprotein
|
1.062e-07
|
|
Internal
|
sp_v3.0_unigene58730
|
SustainPine v3.0
|
327
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
2.0e-18
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Gag-Pol polyprotein
|
1.328e-07
|
|
Internal
|
sp_v3.0_unigene59270
|
SustainPine v3.0
|
431
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
2.0e-40
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.4013e-45
|
|
Internal
|
sp_v3.0_unigene59304
|
SustainPine v3.0
|
184
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
3.0e-12
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Gag-Pol polyprotein
|
8.992e-07
|
|
Internal
|
sp_v3.0_unigene59349
|
SustainPine v3.0
|
422
|
• AutoFact: Embryo globulin n=2 Tax=Triticeae RepID=Q03678_HORVU
|
2.0e-36
|
• FL-Next: tr=Vicilin-like storage protein; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
C-terminus
|
sp_v3.0_unigene59373
|
SustainPine v3.0
|
395
|
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA
|
7.0e-34
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.757e-17
|
|
Internal
|
sp_v3.0_unigene59455
|
SustainPine v3.0
|
488
|
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA
|
1.0e-39
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.676e-13
|
|
Internal
|
sp_v3.0_unigene60275
|
SustainPine v3.0
|
374
|
• AutoFact: Unassigned protein
|
2.0e-29
|
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).
|
0.0
|
|
Putative N-terminus
|
sp_v3.0_unigene60279
|
SustainPine v3.0
|
201
|
• AutoFact: RVT_2 domain containing protein
|
5.0e-17
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
Internal
|
sp_v3.0_unigene62225
|
SustainPine v3.0
|
217
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
1.0e-16
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
sp_v3.0_unigene64069
|
SustainPine v3.0
|
205
|
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA
|
5.0e-21
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Expansin
|
0.0
|
|
Internal
|
sp_v3.0_unigene66263
|
SustainPine v3.0
|
413
|
• AutoFact: Legumin-like storage protein n=1 Tax=Picea glauca RepID=Q40870_PICGL
|
2.0e-35
|
• FL-Next: tr=Legumin-like storage protein; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Legumin
|
8.957e-25
|
|
C-terminus
|
sp_v3.0_unigene66419
|
SustainPine v3.0
|
358
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ
|
1.0e-24
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.608e-16
|
|
Internal
|
sp_v3.0_unigene66628
|
SustainPine v3.0
|
318
|
• AutoFact: pfam00190, Cupin_1, Cupin
|
6.0e-21
|
• FL-Next: tr=Pine globulin-2; Pinus strobus (Eastern white pine).
|
0.0
|
|
Internal
|
sp_v3.0_unigene66640
|
SustainPine v3.0
|
351
|
• AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB
|
7.00649e-45
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Germin-like protein
|
4.475e-35
|
|
Internal
|
sp_v3.0_unigene66954
|
SustainPine v3.0
|
334
|
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH
|
2.0e-29
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.419e-18
|
|
Internal
|
sp_v3.0_unigene67143
|
SustainPine v3.0
|
363
|
• AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS
|
2.0e-22
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Putative retroelement pol polyprotein
|
8.891e-09
|
|
Internal
|