Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: EGF-like region, conserved site

Term: IPR013032  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene162234 SustainPine v3.0 278
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.606e-15
Internal
sp_v3.0_unigene162400 SustainPine v3.0 342
• AutoFact: protein kinase family protein [Arabidopsis thaliana] gb|AED93254.1| protein kinase family protein [Arabidopsis thaliana] 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative S-domain receptor-like protein kinase 3.349e-15
Internal
sp_v3.0_unigene163039 SustainPine v3.0 420
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 1.0e-35
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
C-terminus
sp_v3.0_unigene163066 SustainPine v3.0 259
• AutoFact: pfam00078, RVT_1, Reverse transcriptase (RNA-dependent DNA polymerase) 3.0e-17
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
C-terminus
sp_v3.0_unigene163092 SustainPine v3.0 356
• AutoFact: Receptor serine/threonine kinase, putative n=1 Tax=Ricinus communis RepID=B9RIJ3_RICCO 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr16 scaffold_86, whole genome shotgun sequence 6.888e-12
Internal
sp_v3.0_unigene163210 SustainPine v3.0 306
• AutoFact: Adenylosuccinate synthetase n=1 Tax=Picea sitchensis RepID=D5A8A1_PICSI 1.0e-32
• FL-Next: sp=Adenylosuccinate synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenylosuccinate synthetase 0.0
Internal
sp_v3.0_unigene163485 SustainPine v3.0 342
• AutoFact: rve domain containing protein 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene163541 SustainPine v3.0 187
• AutoFact: Gag-pol polyprotein n=3 Tax=Zea mays RepID=Q8L7J3_MAIZE 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 4.454e-14
Putative C-terminus
sp_v3.0_unigene164018 SustainPine v3.0 280
• AutoFact: [J] COG2075 Ribosomal protein L24E 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene164128 SustainPine v3.0 335
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 1.985e-12
Internal
sp_v3.0_unigene164188 SustainPine v3.0 275
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q56GE2_GINBI 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v3.0_unigene164207 SustainPine v3.0 250
• AutoFact: DUF868 domain containing protein 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene164460 SustainPine v3.0 341
• AutoFact: Putative serine/threonine receptor protein kinase STK3 (Fragment) n=2 Tax=Magnoliophyta RepID=Q5Y4A2_CARPA 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-domain receptor-like protein kinase 3.285e-15
Internal
sp_v3.0_unigene164730 SustainPine v3.0 178
• AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Sciadopitys verticillata RepID=Q56GF7_SCIVE 3.0e-20
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene165001 SustainPine v3.0 240
• AutoFact: Putative receptor-like protein kinase 2 (Fragment) n=1 Tax=Musa acuminata RepID=Q64GB6_MUSAC 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-domain receptor-like protein kinase 1.319e-11
Internal
sp_v3.0_unigene165373 SustainPine v3.0 428
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 4.813e-10
Internal
sp_v3.0_unigene165783 SustainPine v3.0 285
• AutoFact: Protein kinase [Medicago truncatula] 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative rust resistance kinase Lr10 4.383e-34
Internal
sp_v3.0_unigene166072 SustainPine v3.0 245
• AutoFact: Class IV chitinase Chia4-Pa1.3 n=8 Tax=Picea RepID=Q6WSS1_PICAB 3.0e-37
• FL-Next: tr=Class IV chitinase A; Pinus monticola (Western white pine) (Strobus monticola). 0.0
• Sma3: Class IV chitinase 1.352e-22
C-terminus
sp_v3.0_unigene166114 SustainPine v3.0 423
• AutoFact: Class IV chitinase n=7 Tax=Pinaceae RepID=C3VP99_PSEMZ 0.0
• FL-Next: tr=Class II chitinase 4-1; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Class IV chitinase 2.622e-28
Internal
sp_v3.0_unigene166434 SustainPine v3.0 354
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49170, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 2261; Flags: Precursor gb|AAW62962.1| emb 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 3.148e-19
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain