Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: EGF-like region, conserved site

Term: IPR013032  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene159878 SustainPine v3.0 503
• AutoFact: PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] dbj|BAD95354.1| receptor like protein [Arabidopsis thaliana] gb|AEE84563.1| PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ebs-bah-phd domain-containing protein 6.192e-15
C-terminus
sp_v3.0_unigene159964 SustainPine v3.0 186
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 2.0e-24
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Gag-Pol polyprotein 1.766e-12
Internal
sp_v3.0_unigene160342 SustainPine v3.0 350
• AutoFact: putative receptor-like protein kinase [Oryza sativa Japonica Group] gb|AAT85182.1| hypothetical protein [Oryza sativa Japonica Group] 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative wall-associated kinase 4 4.317e-21
Internal
sp_v3.0_unigene160414 SustainPine v3.0 422
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.17e-19
Internal
sp_v3.0_unigene160427 SustainPine v3.0 375
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZS5_ORYSJ 1.0e-25
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Gag-Pol polyprotein 6.204e-09
Putative C-terminus
sp_v3.0_unigene160443 SustainPine v3.0 364
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.933e-16
Internal
sp_v3.0_unigene160619 SustainPine v3.0 413
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T5G9_RICCO 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 4.274e-14
Putative N-terminus
sp_v3.0_unigene160813 SustainPine v3.0 247
• AutoFact: Pyruvate kinase n=1 Tax=Picea sitchensis RepID=B8LLZ7_PICSI 1.0e-24
• FL-Next: sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pyruvate kinase 4.814e-32
N-terminus
sp_v3.0_unigene160847 SustainPine v3.0 452
• AutoFact: copia-like retrotransposable element [Arabidopsis thaliana] 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.13e-19
Internal
sp_v3.0_unigene160941 SustainPine v3.0 335
• AutoFact: rve domain containing protein 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 5.231e-13
Putative Complete
sp_v3.0_unigene161047 SustainPine v3.0 360
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.72499e-40
Internal
sp_v3.0_unigene161281 SustainPine v3.0 396
• AutoFact: DUF1785 multi-domain protein 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Argonaute protein group 2.45e-16
Complete
sp_v3.0_unigene161401 SustainPine v3.0 235
• AutoFact: Cysteine proteinase (Fragment) n=1 Tax=Dianthus caryophyllus RepID=Q43423_DIACA 3.0e-18
• FL-Next: tr=Pseudotzain; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Cysteine proteinase 0.0
Internal
sp_v3.0_unigene161420 SustainPine v3.0 503
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=7 Tax=Poaceae RepID=Q10IG2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.788e-32
Putative Complete
sp_v3.0_unigene161556 SustainPine v3.0 311
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene161696 SustainPine v3.0 424
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene161710 SustainPine v3.0 416
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.806e-27
Internal
sp_v3.0_unigene162030 SustainPine v3.0 283
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650 gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 3.187e-09
Internal
sp_v3.0_unigene162177 SustainPine v3.0 172
• AutoFact: xylem bark cysteine peptidase 3 [Arabidopsis thaliana] dbj|BAE98853.1| papain-like cysteine peptidase XBCP3 [Arabidopsis thaliana] gb|ABH04597.1| At1g09850 [Arabidopsis thaliana] gb|AEE28507.1| xylem bark cysteine peptidase 3 [Arabidopsis thaliana] 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine protease 1.653e-11
Internal
sp_v3.0_unigene162222 SustainPine v3.0 322
• AutoFact: Class IV chitinase Chia4-Pa1.3 n=8 Tax=Picea RepID=Q6WSS1_PICAB 3.0e-32
• FL-Next: tr=Class IV chitinase A; Pinus monticola (Western white pine) (Strobus monticola). 0.0
• Sma3: Class IV chitinase 3.24e-23
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain