Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: EGF-like region, conserved site

Term: IPR013032  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene44533 SustainPine v3.0 291
• AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AEE83354.1| zinc ion binding protein [Arabidopsis thaliana] 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Putative uncharacterized protein OSJNBa0016A21.104 8.285e-06
Internal
sp_v3.0_unigene44536 SustainPine v3.0 666
• AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 3.741e-07
Internal
sp_v3.0_unigene44629 SustainPine v3.0 529
• AutoFact: Pentatricopeptide repeat protein 65 n=2 Tax=Funariaceae RepID=F5CAD8_FUNHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.276e-12
Putative C-terminus
sp_v3.0_unigene44690 SustainPine v3.0 176
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Poaceae RepID=Q2QUR6_ORYSJ 2.0e-19
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.4e-30
Internal
sp_v3.0_unigene44789 SustainPine v3.0 256
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group] 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.197e-17
Putative N-terminus
sp_v3.0_unigene45122 SustainPine v3.0 480
• AutoFact: adenine nucleotide alpha hydrolases-domain containing protein kinase [Arabidopsis thaliana] gb|AAL57632.1| At1g21590/F24J8_9 [Arabidopsis thaliana] gb|AAM98263.1| At1g21590/F24J8_9 [Arabidopsis thaliana] gb|AEE30121.1| adenine nucleotide alpha hydrolases- 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 4.21e-13
Internal
sp_v3.0_unigene45692 SustainPine v3.0 250
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630 gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana] gb|AEE35616.1 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative 5.81e-08
Putative C-terminus
sp_v3.0_unigene45833 SustainPine v3.0 237
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene45907 SustainPine v3.0 868
• AutoFact: rve domain containing protein 1.0e-26
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00750; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene45908 SustainPine v3.0 492
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene46124 SustainPine v3.0 518
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene46680 SustainPine v3.0 2674
• AutoFact: PA multi-domain protein 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene46997 SustainPine v3.0 227
• AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9SJV6_RICCO 5.0e-27
• FL-Next: sp=Protein argonaute 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Argonaute protein group 5.975e-17
Internal
sp_v3.0_unigene47623 SustainPine v3.0 343
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 3.188e-30
Internal
sp_v3.0_unigene48141 SustainPine v3.0 931
• AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.719e-16
C-terminus
sp_v3.0_unigene48438 SustainPine v3.0 317
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510 dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana] gb|AAT85758.1| At5g08510 [Arabido 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 5.078e-08
Internal
sp_v3.0_unigene48593 SustainPine v3.0 448
• AutoFact: PHD finger transcription factor-like protein [Oryza sativa Japonica Group] 3.0e-28
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene48641 SustainPine v3.0 392
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 3.019e-19
Internal
sp_v3.0_unigene48803 SustainPine v3.0 185
• AutoFact: Os01g0689900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q5N7Q8_ORYSJ 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Wall-associated kinase, putative 1.723e-18
Internal
sp_v3.0_unigene49458 SustainPine v3.0 512
• AutoFact: Integrase (Fragment) n=1 Tax=Gossypium hirsutum RepID=Q7XYU1_GOSHI 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 5.766e-13
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain