Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8836 SustainPine v3.0 3936
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.6e-31
Complete
sp_v3.0_unigene8887 SustainPine v3.0 1009
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9139 SustainPine v3.0 1171
AutoFact: Cytochrome P450 n=1 Tax=Petunia x hybrida RepID=Q9MBF5_PETHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Flavonoid 3'-hydroxylase 0.0
C-terminus
sp_v3.0_unigene9152 SustainPine v3.0 486
AutoFact: putative glutamate receptor ion channel [Arabidopsis thaliana] 0.0
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene9213 SustainPine v3.0 1173
AutoFact: Xyloglucan endotransglycosylase n=2 Tax=Asteroideae RepID=D9I0J0_DAHPI 0.0
FL-Next: sp=Probable xyloglucan endotransglucosylase/hydrolase protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Xyloglucan endotransglycosylase 1.08699e-41
Complete
sp_v3.0_unigene9221 SustainPine v3.0 881
AutoFact: Trans-cinnamate 4-hydroxylase n=2 Tax=Pinaceae RepID=Q9XEH8_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cinnamic acid 4-hydroxylase 0.0
C-terminus
sp_v3.0_unigene9445 SustainPine v3.0 3081
AutoFact: Lipid binding protein, putative n=1 Tax=Ricinus communis RepID=B9S1J0_RICCO 0.0
FL-Next: tr=Lipid binding protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: Kinase-START domain protein 1.751e-08
Complete
sp_v3.0_unigene9494 SustainPine v3.0 645
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 2.0e-33
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 1.26117e-44
C-terminus
sp_v3.0_unigene9507 SustainPine v3.0 1240
AutoFact: RecName: Full=Cytochrome P450 750A1; AltName: Full=Cytochrome P450 CYPC gb|AAX07433.1| cytochrome P450 CYPC [Pinus taeda] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Flavonoid 3'-hydroxylase 2.008e-12
C-terminus
sp_v3.0_unigene9600 SustainPine v3.0 571
AutoFact: Glutaredoxin n=2 Tax=rosids RepID=B9GF65_POPTR 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutaredoxin 0.0
Complete
sp_v3.0_unigene9655 SustainPine v3.0 1121
AutoFact: Piwi domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Argonaute protein group 1.529e-36
Putative Complete
sp_v3.0_unigene9731 SustainPine v3.0 612
AutoFact: pfam12807, eIF3_p135, Translation initiation factor eIF3 subunit 135 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Eukaryotic translation initiation factor 3 subunit, putative 1.816e-10
Internal
sp_v3.0_unigene9770 SustainPine v3.0 910
AutoFact: Mutant gag-pol polyprotein n=2 Tax=Pisum sativum RepID=E7BQD6_PEA 5.0e-21
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Gag-Pol polyprotein 6.554e-13
Putative N-terminus
sp_v3.0_unigene9788 SustainPine v3.0 1925
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9R7H5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene9803 SustainPine v3.0 646
AutoFact: Triacylglycerol lipase n=2 Tax=Arabidopsis thaliana RepID=F4JT30_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein At4g13550; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene9831 SustainPine v3.0 2609
AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 5'->3' exoribonuclease, putative 2.888e-16
Complete
sp_v3.0_unigene9955 SustainPine v3.0 1550
AutoFact: tropine dehydrogenase [Arabidopsis thaliana] dbj|BAA98195.1| short chain alcohol dehydrogenase-like [Arabidopsis thaliana] gb|AAO22710.1| putative short chain alcohol dehydrogenase [Arabidopsis thaliana] gb|AAO42448.1| putative short chain alcohol dehydro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative tropinone reductase 0.0
Complete
sp_v3.0_unigene10100 SustainPine v3.0 408
AutoFact: zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] dbj|BAA97014.1| unnamed protein product [Arabidopsis thaliana] gb|AED95872.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] 4.0e-15
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene10173 SustainPine v3.0 256
AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 5.0e-38
FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 5'->3' exoribonuclease, putative 3.297e-16
Internal
sp_v3.0_unigene10195 SustainPine v3.0 3019
AutoFact: putative casein kinase [Oryza sativa Japonica Group] gb|AAV59374.1| putative casein kinase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Casein kinase, putative 1.206e-18
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain