Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene32215 SustainPine v3.0 509
AutoFact: histone H4 [Hyacinthus orientalis] 2.0e-34
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 3.748e-14
Complete
sp_v3.0_unigene32276 SustainPine v3.0 431
AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Germin-like protein 7.44e-30
Putative C-terminus
sp_v3.0_unigene32430 SustainPine v3.0 623
AutoFact: Actophorin n=1 Tax=Acanthamoeba castellanii RepID=ACTP_ACACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 6.985e-21
Complete
sp_v3.0_unigene32431 SustainPine v3.0 1192
AutoFact: germin-like protein 1 [Picea abies] 0.0
FL-Next: sp=Germin-like protein 8-2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Germin-like protein 1.824e-37
Complete
sp_v3.0_unigene32448 SustainPine v3.0 750
AutoFact: FAP multi-domain protein 9.0e-12
putative_coding
sp_v3.0_unigene32621 SustainPine v3.0 742
AutoFact: Glutathione S-transferase-like protein n=13 Tax=Picea sitchensis RepID=C0PR46_PICSI 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione S-transferase 0.0
C-terminus
sp_v3.0_unigene32634 SustainPine v3.0 515
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene32750 SustainPine v3.0 1029
AutoFact: putative zinc finger protein [Hyacinthus orientalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein HEXBP 1.023e-08
Putative Complete
sp_v3.0_unigene32755 SustainPine v3.0 1610
AutoFact: Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic n=1 Tax=Medicago truncatula RepID=Q2HU05_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene32796 SustainPine v3.0 283
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 7.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.397e-12
Internal
sp_v3.0_unigene32931 SustainPine v3.0 668
AutoFact: Actophorin n=1 Tax=Acanthamoeba castellanii RepID=ACTP_ACACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 1.983e-28
Complete
sp_v3.0_unigene32943 SustainPine v3.0 839
AutoFact: Glycine-rich RNA-binding protein n=1 Tax=Sequoia sempervirens RepID=E5FXB3_SEQSE 9.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene32946 SustainPine v3.0 575
AutoFact: Calmodulin n=3 Tax=Zea mays RepID=B6SMJ0_MAIZE 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene33013 SustainPine v3.0 354
AutoFact: Cinnamyl-alcohol dehydrogenase n=1 Tax=Brassica rapa subsp. campestris RepID=C3VI12_BRACM 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dihydroflavonol 4-reductase 0.0
N-terminus
sp_v3.0_unigene33015 SustainPine v3.0 845
AutoFact: Germin-like protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RQ32_PHYPA 0.0
FL-Next: sp=Germin-like protein subfamily 2 member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Germin-like protein 4.17587e-43
Complete
sp_v3.0_unigene33049 SustainPine v3.0 854
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.447e-16
C-terminus
sp_v3.0_unigene33075 SustainPine v3.0 819
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene33237 SustainPine v3.0 595
AutoFact: RNA-binding protein precursor [Solanum tuberosum] 3.0e-15
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Putative RNA-binding protein 5.644e-08
Complete
sp_v3.0_unigene33300 SustainPine v3.0 908
AutoFact: Phi class glutathione transferase n=1 Tax=Cathaya argyrophylla RepID=B8YDC4_9CONI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione S-transferase 0.0
Complete
sp_v3.0_unigene33402 SustainPine v3.0 2243
AutoFact: rve domain containing protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain