Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene28269 SustainPine v3.0 1372
• AutoFact: Glycerophosphoryl diester phosphodiesterase, putative n=1 Tax=Ricinus communis RepID=B9SSQ8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycerophosphoryl diester phosphodiesterase, putative 2.004e-07
Putative Complete
sp_v3.0_unigene28339 SustainPine v3.0 958
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_89.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SMT7_VITVI 0.0
• FL-Next: sp=Reticuline oxidase-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Reticuline oxidase, putative 3.063e-30
Putative C-terminus
sp_v3.0_unigene28506 SustainPine v3.0 1068
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: PHD-finger family protein, expressed 9.412e-08
Internal
sp_v3.0_unigene28647 SustainPine v3.0 972
• AutoFact: transcription initiation factor TFIID subunit 1-A [Arabidopsis thaliana] sp|Q8LRK9.1|TAF1A_ARATH RecName: Full=Transcription initiation factor TFIID subunit 1-A; Short=AtTAF1a; AltName: Full=TAFII250-A gb|AAM34782.1|AF510669_1 HAF1 [Arabidopsis thaliana] 6.02558e-44
• FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcription initiation factor TFIID, subunit TAF1 4.823e-09
C-terminus
sp_v3.0_unigene28648 SustainPine v3.0 534
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene28886 SustainPine v3.0 449
• AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AAB60741.1| F21M12.27 gene product [Arabidopsis thaliana] gb|AEE28510.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Lyase, putative 1.344e-27
Putative N-terminus
sp_v3.0_unigene28901 SustainPine v3.0 2333
• AutoFact: Ras-related protein Rab7 n=11 Tax=core eudicotyledons RepID=RAB7_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 1.547e-23
Putative Complete
sp_v3.0_unigene28979 SustainPine v3.0 1108
• AutoFact: Nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q8L9J7.1|SWET1_ARATH RecName: Full=Bidirectional sugar transporter SWEET1; Short=AtSWEET1 gb|AAM65929.1| unknown [Arabidopsis thaliana] gb|AAO42204.1| unknown protein [Arabidopsis thaliana] gb|AAO63896.1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Seven-transmembrane-domain protein 1 1.016e-20
Complete
sp_v3.0_unigene29116 SustainPine v3.0 1167
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SF98_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 5.578e-13
C-terminus
sp_v3.0_unigene29170 SustainPine v3.0 681
• AutoFact: UDP-glucose:salicylic acid glucosyltransferase [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: UDP-glucosyltransferase, putative 2.027e-32
C-terminus
sp_v3.0_unigene29188 SustainPine v3.0 1781
• AutoFact: MYB transcription factor MYB93 n=2 Tax=Glycine max RepID=Q0PJJ8_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene29208 SustainPine v3.0 403
• AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 9.99995e-41
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 1.4013e-45
C-terminus
sp_v3.0_unigene29248 SustainPine v3.0 530
• AutoFact: lipase-3 domain-containing protein [Arabidopsis thaliana] gb|AAG51101.1|AC025295_9 lipase, putative [Arabidopsis thaliana] gb|AEE31210.1| lipase-3 domain-containing protein [Arabidopsis thaliana] 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Triacylglycerol lipase like protein 3.433e-08
Internal
sp_v3.0_unigene29396 SustainPine v3.0 1253
• AutoFact: Mutant gag-pol polyprotein n=2 Tax=Pisum sativum RepID=E7BQD6_PEA 1.0e-27
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 2.52e-36
Putative N-terminus
sp_v3.0_unigene29518 SustainPine v3.0 1206
• AutoFact: Dimer_Tnp_hAT domain containing protein 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene29752 SustainPine v3.0 2409
• AutoFact: 5'->3' exoribonuclease, putative n=1 Tax=Ricinus communis RepID=B9R871_RICCO 0.0
• FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 5'->3' exoribonuclease, putative 8.416e-16
N-terminus
sp_v3.0_unigene29870 SustainPine v3.0 1692
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 1.199e-12
Putative Complete
sp_v3.0_unigene30102 SustainPine v3.0 950
• AutoFact: Drf_FH1 multi-domain protein 1.0e-21
• Sma3: Glycine-rich protein 4.83e-14
coding
sp_v3.0_unigene30125 SustainPine v3.0 826
• AutoFact: Aquaporin-like protein n=1 Tax=Picea abies RepID=O65860_PICAB 0.0
• FL-Next: tr=Aquaporin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Aquaporin, MIP family, TIP subfamily 4.13944e-42
C-terminus
sp_v3.0_unigene30325 SustainPine v3.0 986
• AutoFact: Cupin_1 multi-domain protein 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Germin-like protein 1.807e-37
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain