Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene210049 SustainPine v3.0 218
AutoFact: cytochrome P450 [Pyrus communis] 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome P450-dependent monooxygenase 2.304e-13
Internal
sp_v3.0_unigene210063 SustainPine v3.0 173
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 7.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 6.091e-29
C-terminus
sp_v3.0_unigene210187 SustainPine v3.0 396
AutoFact: Cationic amino acid transporter n=2 Tax=Populus RepID=B9GYF7_POPTR 1.0e-38
FL-Next: sp=Cationic amino acid transporter 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cationic amino acid transporter 2.138e-28
Internal
sp_v3.0_unigene210218 SustainPine v3.0 503
AutoFact: Aquaporin-like protein n=1 Tax=Picea abies RepID=O65860_PICAB 4.06377e-44
FL-Next: tr=Aquaporin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Aquaporin, MIP family, TIP subfamily 2.811e-42
C-terminus
sp_v3.0_unigene210259 SustainPine v3.0 1208
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear transcription factor Y subunit A-3 1.149e-09
C-terminus
sp_v3.0_unigene210260 SustainPine v3.0 1053
AutoFact: Pre-mRNA-splicing factor SLU7-A [Arabidopsis thaliana] sp|Q9SHY8.2|SLU7A_ARATH RecName: Full=Pre-mRNA-splicing factor SLU7-A gb|AAO22622.1| putative step II splicing factor [Arabidopsis thaliana] gb|AEE34408.1| Pre-mRNA-splicing factor SLU7-A [Arabidopsis 0.0
FL-Next: sp=Pre-mRNA-splicing factor SLU7-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene210275 SustainPine v3.0 943
AutoFact: KH_1 domain containing protein 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene210488 SustainPine v3.0 259
AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.719e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain