Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene193968 SustainPine v3.0 570
AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS 2.0e-39
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.18e-18
C-terminus
sp_v3.0_unigene194065 SustainPine v3.0 649
AutoFact: Glycerophosphoryl diester phosphodiesterase 2-like n=1 Tax=Oryza sativa Japonica Group RepID=Q6ESM8_ORYSJ 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene194236 SustainPine v3.0 488
AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene194249 SustainPine v3.0 546
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 3.0e-22
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene194254 SustainPine v3.0 506
AutoFact: PREDICTED: similar to retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Vitis vinifera RepID=UPI000198569A 1.00053e-42
FL-Next: tr=Retrotransposon protein; Beta vulgaris (Sugar beet). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 6.18505e-41
Internal
sp_v3.0_unigene194418 SustainPine v3.0 493
AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.935e-12
Internal
sp_v3.0_unigene194558 SustainPine v3.0 303
AutoFact: RVT_2 domain containing protein 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polyprotein 1.842e-07
N-terminus
sp_v3.0_unigene194616 SustainPine v3.0 429
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene194657 SustainPine v3.0 500
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene195211 SustainPine v3.0 326
AutoFact: Unassigned protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene195366 SustainPine v3.0 304
AutoFact: Protein argonaute 7 n=3 Tax=Oryza sativa RepID=AGO7_ORYSJ 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Argonaute protein group 1.402e-36
Internal
sp_v3.0_unigene195445 SustainPine v3.0 210
AutoFact: Histidine kinase 1 plant, putative n=1 Tax=Ricinus communis RepID=B9SUH7_RICCO 1.0e-21
FL-Next: sp=Histidine kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histidine kinase 1 plant, putative 2.205e-11
Internal
sp_v3.0_unigene195473 SustainPine v3.0 212
AutoFact: Pol polyprotein n=1 Tax=Citrus x paradisi RepID=Q94FM1_CITPA 1.0e-08
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative C-terminus
sp_v3.0_unigene195550 SustainPine v3.0 467
AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 9.0e-29
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Putative pol polyprotein 1.977e-09
C-terminus
sp_v3.0_unigene195563 SustainPine v3.0 471
AutoFact: Cir, putative n=1 Tax=Ricinus communis RepID=B9S1S8_RICCO 7.0e-24
FL-Next: sp=Uncharacterized zinc finger CCHC domain-containing protein At4g19190; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene195604 SustainPine v3.0 456
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 2.0e-31
FL-Next: tr=Putative non-LTR retroelement reverse transcriptase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative non-LTR retroelement reverse transcriptase 2.784e-06
Internal
sp_v3.0_unigene195650 SustainPine v3.0 255
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 2.399e-08
Putative C-terminus
sp_v3.0_unigene195707 SustainPine v3.0 207
AutoFact: Glutathione S-transferase-like protein n=13 Tax=Picea sitchensis RepID=C0PR46_PICSI 2.0e-20
FL-Next: tr=Glutathione S-transferase-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione S-transferase 2.484e-14
Putative C-terminus
sp_v3.0_unigene195741 SustainPine v3.0 257
AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene195787 SustainPine v3.0 282
AutoFact: anthocyanidin reductase [Ginkgo biloba] 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dihydroflavonol 4-reductase 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain