Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene183742 SustainPine v3.0 497
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R3I0_ORYSJ 8.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene183762 SustainPine v3.0 407
• AutoFact: cysteine-rich receptor-like protein kinase 7 [Arabidopsis thaliana] sp|Q8L7G3.1|CRK7_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 7; Short=Cysteine-rich RLK7; Flags: Precursor gb|AAM91654.1| putative serine/threonine kinase [Arabidopsis 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 1.651e-15
Internal
sp_v3.0_unigene183790 SustainPine v3.0 709
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 7.00649e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 9.101e-11
Putative C-terminus
sp_v3.0_unigene183838 SustainPine v3.0 560
• AutoFact: F5K24.2 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZPG3_ARATH 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polyprotein, putative 4.764e-06
Internal
sp_v3.0_unigene183841 SustainPine v3.0 449
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 6.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene184262 SustainPine v3.0 626
• AutoFact: Integrase n=2 Tax=Beta vulgaris RepID=A2I5F8_BETVU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.667e-27
Putative C-terminus
sp_v3.0_unigene184416 SustainPine v3.0 683
• AutoFact: OSJNBb0034I13.10 protein n=2 Tax=Oryza sativa RepID=Q7XTU6_ORYSA 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene184477 SustainPine v3.0 473
• AutoFact: dead-box helicase [Platanus x acerifolia] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.77e-21
Putative C-terminus
sp_v3.0_unigene184567 SustainPine v3.0 689
• AutoFact: rve domain containing protein 7.0e-06
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene184586 SustainPine v3.0 416
• AutoFact: Zinc finger protein n=3 Tax=Arabidopsis RepID=Q8LEE4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene184621 SustainPine v3.0 454
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 5.0e-40
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.666e-08
C-terminus
sp_v3.0_unigene184753 SustainPine v3.0 501
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 2.608e-10
Putative C-terminus
sp_v3.0_unigene184823 SustainPine v3.0 452
• AutoFact: cytochrome P450 family protein [Musa acuminata] 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450, putative 2.179e-13
Putative C-terminus
sp_v3.0_unigene185087 SustainPine v3.0 795
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 6.499e-11
C-terminus
sp_v3.0_unigene185112 SustainPine v3.0 317
• AutoFact: Integrase (Fragment) n=1 Tax=Gossypium herbaceum RepID=Q7XYU4_GOSHE 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.085e-09
Internal
sp_v3.0_unigene185359 SustainPine v3.0 599
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.416e-08
Internal
sp_v3.0_unigene185387 SustainPine v3.0 660
• AutoFact: Unassigned protein 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene185558 SustainPine v3.0 534
• AutoFact: putative UDP-glucose:salicylic acid glucosyltransferase [Oryza sativa Japonica Group] dbj|BAD34360.1| putative UDP-glucose:salicylic acid glucosyltransferase [Oryza sativa Japonica Group] 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: UDP-glucosyltransferase, putative 5.073e-30
C-terminus
sp_v3.0_unigene186078 SustainPine v3.0 442
• AutoFact: Histone H4, major n=31 Tax=Oligohymenophorea RepID=H41_TETPY 4.0e-38
• FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Histone H4 1.127e-11
Complete
sp_v3.0_unigene186194 SustainPine v3.0 384
• AutoFact: Cytochrome P450 78A4 n=1 Tax=Pinus radiata RepID=C78A4_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Flavonoid 3'-hydroxylase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain