Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene167065 SustainPine v3.0 143
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Gossypium barbadense RepID=Q96421_GOSBA 1.0e-08
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 2.271e-36
Internal
sp_v3.0_unigene167148 SustainPine v3.0 450
AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 5.0e-25
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene167162 SustainPine v3.0 291
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SSW1_RICCO 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
Putative N-terminus
sp_v3.0_unigene167181 SustainPine v3.0 289
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon Tto1 DNA 3.899e-06
Internal
sp_v3.0_unigene167199 SustainPine v3.0 273
AutoFact: osmosensor histidine-aspartate kinase [Populus x canadensis] 6.0e-19
FL-Next: sp=Histidine kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histidine kinase 1 plant, putative 2.205e-11
Internal
sp_v3.0_unigene167223 SustainPine v3.0 204
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167226 SustainPine v3.0 218
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 5.0e-17
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene167227 SustainPine v3.0 300
AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: T28P6.8 protein 6.823e-06
Internal
sp_v3.0_unigene167264 SustainPine v3.0 283
AutoFact: GK15001 gene product from transcript GK15001-RA 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167300 SustainPine v3.0 281
AutoFact: Polyprotein (Fragment) n=1 Tax=Cynara cardunculus var. scolymus RepID=Q153Y6_CYNSC 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene167362 SustainPine v3.0 209
AutoFact: Unassigned protein 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167370 SustainPine v3.0 239
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 6.289e-40
Putative Complete
sp_v3.0_unigene167387 SustainPine v3.0 231
AutoFact: similar to Copia protein (Gag-int-pol protein) 3.0e-16
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene167394 SustainPine v3.0 239
AutoFact: [Q] COG2124 Cytochrome P450 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Flavonoid 3'-hydroxylase 1.072e-19
Internal
sp_v3.0_unigene167421 SustainPine v3.0 302
AutoFact: Unassigned protein 1.0e-18
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative N-terminus
sp_v3.0_unigene167568 SustainPine v3.0 304
AutoFact: Xyloglucan endotraglucosylase/hydrolase n=1 Tax=Vigna angularis RepID=C5G5Y5_PHAAN 5.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglucosylase/hydrolase protein 2, putative 2.186e-16
Internal
sp_v3.0_unigene167736 SustainPine v3.0 194
AutoFact: Os08g0133100 protein n=2 Tax=Oryza sativa RepID=Q0J867_ORYSJ 8.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.285e-08
Internal
sp_v3.0_unigene167753 SustainPine v3.0 206
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-09
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00820; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Copia-like retrotransposable element 7.797e-06
Putative N-terminus
sp_v3.0_unigene167762 SustainPine v3.0 204
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-15
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene167764 SustainPine v3.0 251
AutoFact: GK15001 gene product from transcript GK15001-RA 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain