Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene21865 SustainPine v3.0 552
• AutoFact: RNA-binding protein precursor [Nicotiana tabacum] 2.0e-15
• FL-Next: tr=Glycine-rich RNA-binding protein; Sequoia sempervirens (California redwood) (Taxodium sempervirens). 0.0
• Sma3: RNA-binding protein 3.116e-06
N-terminus
sp_v3.0_unigene21882 SustainPine v3.0 536
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 9.00054e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.704e-32
Internal
sp_v3.0_unigene21911 SustainPine v3.0 814
• AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA 0.0
• FL-Next: tr=Germin-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Germin-like protein 5.136e-29
Complete
sp_v3.0_unigene21921 SustainPine v3.0 485
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 3.0e-18
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene21948 SustainPine v3.0 1761
• AutoFact: RecName: Full=Cytochrome P450 750A1; AltName: Full=Cytochrome P450 CYPC gb|AAX07433.1| cytochrome P450 CYPC [Pinus taeda] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Flavonoid 3'-hydroxylase 0.0
Complete
sp_v3.0_unigene21950 SustainPine v3.0 883
• AutoFact: putative receptor-like protein kinase [Arabidopsis thaliana] sp|O04086.1|Y1105_ARATH RecName: Full=Probable receptor-like protein kinase At1g11050; Flags: Precursor gb|AAB65477.1| Ser/Thr protein kinase isolog; 46094-44217 [Arabidopsis thaliana] gb|AEE286 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 9.239e-17
C-terminus
sp_v3.0_unigene21992 SustainPine v3.0 521
• AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene22003 SustainPine v3.0 2092
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 2.23e-07
N-terminus
sp_v3.0_unigene22015 SustainPine v3.0 362
• AutoFact: Histidine kinase osmosensor protein n=4 Tax=Populus RepID=B9MXE3_POPTR 9.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histidine kinase osmosensor protein 1.347e-08
C-terminus
sp_v3.0_unigene22017 SustainPine v3.0 396
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene22026 SustainPine v3.0 870
• AutoFact: Germin-like protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RQ32_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Germin-like protein 6.51604e-43
Complete
sp_v3.0_unigene22035 SustainPine v3.0 601
• AutoFact: Huntingtin interacting protein, putative n=1 Tax=Ricinus communis RepID=B9RPN1_RICCO 2.0e-25
• FL-Next: sp=Probable histone-lysine N-methyltransferase ATXR3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SET domain protein 8.849e-07
Internal
sp_v3.0_unigene22064 SustainPine v3.0 1877
• AutoFact: cytochrome P450 [Pyrus communis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 2.527e-17
Complete
sp_v3.0_unigene22092 SustainPine v3.0 847
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Gag-Pol polyprotein 1.126e-11
Internal
sp_v3.0_unigene22130 SustainPine v3.0 564
• AutoFact: Cytochrome P450 78A4 n=1 Tax=Pinus radiata RepID=C78A4_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 1.109e-23
C-terminus
sp_v3.0_unigene22146 SustainPine v3.0 670
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.064e-38
Internal
sp_v3.0_unigene22156 SustainPine v3.0 1286
• AutoFact: Cinnamyl alcohol dehydrogenase n=1 Tax=Eucommia ulmoides RepID=Q506M2_EUCUL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cinnamoyl-CoA reductase 1.59748e-43
Complete
sp_v3.0_unigene22183 SustainPine v3.0 618
• AutoFact: Ras-related protein Rab7 n=11 Tax=core eudicotyledons RepID=RAB7_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 2.204e-12
N-terminus
sp_v3.0_unigene22246 SustainPine v3.0 931
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI6_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
N-terminus
sp_v3.0_unigene22301 SustainPine v3.0 421
• AutoFact: 5'-3' exoribonuclease 3 [Arabidopsis thaliana] sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein EXORIBONUCLEASE 3 gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana] gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis t 0.0
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
• Sma3: 5'->3' exoribonuclease, putative 6.254e-16
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain