Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Double-stranded RNA-binding-like

Term: IPR014720  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene62477 SustainPine v3.0 288
• AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 2.0e-26
• FL-Next: sp=Regulatory-associated protein of TOR 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene62929 SustainPine v3.0 233
• AutoFact: HVSL domain containing protein 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63305 SustainPine v3.0 169
• AutoFact: ATP-dependent RNA helicase A-like protein n=2 Tax=Arabidopsis RepID=Q9FF84_ARATH 3.0e-14
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: ATP-dependent RNA helicase, putative 5.145e-09
Internal
sp_v3.0_unigene63357 SustainPine v3.0 144
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene63777 SustainPine v3.0 298
• AutoFact: putative ATP-dependent RNA helicase [Oryza sativa Japonica Group] 5.0e-17
• FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene64467 SustainPine v3.0 149
• AutoFact: Dicer-like protein 4 n=3 Tax=Arabidopsis RepID=DCL4_ARATH 1.0e-10
• FL-Next: sp=Dicer-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Dicer-like 4 3.861e-09
Internal
sp_v3.0_unigene64589 SustainPine v3.0 235
• AutoFact: RecName: Full=Endoribonuclease Dicer homolog 1; AltName: Full=Dicer-like protein 1; Short=OsDCL1 gb|AAM52322.1|AC105363_11 Putative CAF protein [Oryza sativa Japonica Group] gb|ABF93701.1| DEAD/DEAH box helicase carpel factory, putative, expressed [Oryza 5.0e-08
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene65779 SustainPine v3.0 205
• AutoFact: dsRNA-binding protein 2 [Arabidopsis thaliana] sp|Q9SKN2.1|DRB2_ARATH RecName: Full=Double-stranded RNA-binding protein 2; AltName: Full=dsRNA-binding protein 2; Short=AtDRB2 gb|AAD20688.1| expressed protein [Arabidopsis thaliana] gb|AAK59481.1| unknown p 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Double-stranded RNA binding protein 2.195e-12
Putative N-terminus
sp_v3.0_unigene66480 SustainPine v3.0 335
• AutoFact: Exo-beta-glucanase n=1 Tax=Lilium longiflorum RepID=Q6UY81_LILLO 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-D-glucan exohydrolase-like protein 2.89e-17
Internal
sp_v3.0_unigene67133 SustainPine v3.0 202
• AutoFact: putative helicase [Oryza sativa Japonica Group] 4.0e-08
• FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
Putative C-terminus
sp_v3.0_unigene67173 SustainPine v3.0 281
• AutoFact: Dicer-like 3 n=1 Tax=Physcomitrella patens RepID=B3SRQ0_9BRYO 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dicer-like 3 9.643e-09
Internal
sp_v3.0_unigene68057 SustainPine v3.0 131
• AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 5.0e-11
• FL-Next: tr=ATP-dependent RNA helicase Dhx29; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: ATP-dependent RNA helicase, putative 4.01e-12
Internal
sp_v3.0_unigene68169 SustainPine v3.0 186
• AutoFact: Unassigned protein
• FL-Next: sp=Regulatory-associated protein of TOR 2; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene68688 SustainPine v3.0 153
• AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9GRS6_POPTR 8.0e-17
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene69409 SustainPine v3.0 181
• AutoFact: transducin/WD-40 repeat protein [Oryza sativa Japonica Group] 4.0e-16
• FL-Next: sp=Regulatory-associated protein of TOR 2; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene70067 SustainPine v3.0 329
• AutoFact: putative 40S ribosomal protein S2 [Oryza sativa Japonica Group] 2.0e-29
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 3.791e-15
C-terminus
sp_v3.0_unigene70783 SustainPine v3.0 358
• AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 3.244e-15
N-terminus
sp_v3.0_unigene71101 SustainPine v3.0 244
• AutoFact: Glycosyl hydrolase-like protein (Fragment) n=13 Tax=Picea sitchensis RepID=E0ZH83_PICSI 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-D-glucan exohydrolase-like protein 4.176e-21
Internal
sp_v3.0_unigene71178 SustainPine v3.0 418
• AutoFact: Double-stranded RNA binding protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TDF6_PHYPA 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Double-stranded RNA binding protein 8.582e-17
N-terminus
sp_v3.0_unigene71697 SustainPine v3.0 385
• AutoFact: Unassigned protein
• FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain