Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Double-stranded RNA-binding-like

Term: IPR014720  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene17215 SustainPine v3.0 1581
AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S2 2.815e-19
Complete
sp_v3.0_unigene17510 SustainPine v3.0 1688
AutoFact: Exo-beta-glucanase n=1 Tax=Lilium longiflorum RepID=Q6UY81_LILLO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-D-glucan exohydrolase-like protein 6.769e-21
C-terminus
sp_v3.0_unigene18100 SustainPine v3.0 2358
AutoFact: double-stranded RNA-binding (DsRBD) domain-containing protein [Musa acuminata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Double-stranded RNA binding protein 4.665e-12
Complete
sp_v3.0_unigene22118 SustainPine v3.0 591
AutoFact: double-stranded RNA-binding (DsRBD) domain-containing protein [Musa acuminata] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Os05g0150400 protein 6.823e-06
Internal
sp_v3.0_unigene26477 SustainPine v3.0 382
AutoFact: 40S ribosomal protein S2 [Aedes aegypti] ref|XP_001654299.1| 40S ribosomal protein S2 [Aedes aegypti] gb|ABF18026.1| ribosomal protein S2 [Aedes aegypti] gb|EAT37898.1| 40S ribosomal protein S2 [Aedes aegypti] gb|EAT37899.1| 40S ribosomal protein S2 [Aede 4.00001e-40
FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 40S ribosomal protein S2 2.066e-19
Internal
sp_v3.0_unigene28941 SustainPine v3.0 642
AutoFact: putative helicase [Oryza sativa Japonica Group] 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene31235 SustainPine v3.0 1253
AutoFact: Hydrolase, hydrolyzing O-glycosyl compounds, putative n=1 Tax=Ricinus communis RepID=B9SD66_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-D-glucan exohydrolase-like protein 5.787e-21
C-terminus
sp_v3.0_unigene34076 SustainPine v3.0 2112
AutoFact: CAF protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dicer-like protein 3.451e-16
C-terminus
sp_v3.0_unigene34418 SustainPine v3.0 710
AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S2 1.932e-19
N-terminus
sp_v3.0_unigene34464 SustainPine v3.0 1078
AutoFact: Exo-beta-glucanase n=1 Tax=Lilium longiflorum RepID=Q6UY81_LILLO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-D-glucan exohydrolase-like protein 5.787e-21
Internal
sp_v3.0_unigene35397 SustainPine v3.0 2019
AutoFact: Hydrolase, hydrolyzing O-glycosyl compounds, putative n=1 Tax=Ricinus communis RepID=B9SD66_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-D-glucan exohydrolase-like protein 8.329e-21
Complete
sp_v3.0_unigene37120 SustainPine v3.0 1910
AutoFact: RecName: Full=Endoribonuclease Dicer homolog 4; AltName: Full=Dicer-like protein 4; Short=OsDCL4; AltName: Full=Protein SHOOT ORGANIZATION 1 gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene39113 SustainPine v3.0 441
AutoFact: [G] COG1472 Beta-glucosidase-related glycosidases 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-D-glucan exohydrolase-like protein 5.075e-21
N-terminus
sp_v3.0_unigene41956 SustainPine v3.0 277
AutoFact: putative helicase [Oryza sativa Japonica Group] 3.0e-15
FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene41992 SustainPine v3.0 156
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 7.0e-19
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 6.053e-16
Internal
sp_v3.0_unigene42983 SustainPine v3.0 1143
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.995e-16
Putative N-terminus
sp_v3.0_unigene43557 SustainPine v3.0 349
AutoFact: exo-beta-glucanase [Lilium longiflorum] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-D-glucan exohydrolase-like protein 8.681e-14
C-terminus
sp_v3.0_unigene45677 SustainPine v3.0 170
AutoFact: putative helicase [Oryza sativa Japonica Group] 9.0e-24
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.937e-09
Internal
sp_v3.0_unigene46021 SustainPine v3.0 790
AutoFact: 40S ribosomal protein S2 n=1 Tax=Picea abies RepID=Q9AVU0_PICAB 2.0e-36
FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 40S ribosomal protein S2 2.544e-19
C-terminus
sp_v3.0_unigene46995 SustainPine v3.0 176
AutoFact: Unassigned protein
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain