Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Double-stranded RNA-binding-like

Term: IPR014720  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene138277 SustainPine v3.0 309
• AutoFact: dsRNA-binding protein LH1 [Brassica oleracea var. capitata] 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene138468 SustainPine v3.0 391
• AutoFact: Unassigned protein 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene138740 SustainPine v3.0 235
• AutoFact: putative ribosomal protein S5 [Oryza sativa Japonica Group] 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S5 containing protein, expressed 9.077e-09
C-terminus
sp_v3.0_unigene140718 SustainPine v3.0 698
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
N-terminus
sp_v3.0_unigene140798 SustainPine v3.0 713
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene143341 SustainPine v3.0 656
• AutoFact: Glycosyl hydrolase-like protein (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z5X8_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-D-glucan exohydrolase-like protein 4.854e-21
Internal
sp_v3.0_unigene144097 SustainPine v3.0 256
• AutoFact: 40S ribosomal protein S2 n=1 Tax=Picea abies RepID=Q9AVU0_PICAB 3.0e-22
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 3.659e-15
Putative C-terminus
sp_v3.0_unigene145320 SustainPine v3.0 374
• AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RX76_PHYPA 2.0e-18
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Putative C-terminus
sp_v3.0_unigene145452 SustainPine v3.0 329
• AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI 1.0e-15
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene145562 SustainPine v3.0 354
• AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI 3.0e-28
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Putative C-terminus
sp_v3.0_unigene145666 SustainPine v3.0 305
• AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI 1.4013e-45
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Internal
sp_v3.0_unigene148679 SustainPine v3.0 209
• AutoFact: putative helicase [Oryza sativa Japonica Group] 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: ATP-dependent RNA helicase, putative 3.916e-06
Internal
sp_v3.0_unigene148755 SustainPine v3.0 269
• AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 1.55e-07
Putative N-terminus
sp_v3.0_unigene149740 SustainPine v3.0 207
• AutoFact: ribosomal protein S2 [Coprinopsis cinerea okayama7#130] gb|EAU91621.1| ribosomal protein S2 [Coprinopsis cinerea okayama7#130] 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 1.709e-19
Internal
sp_v3.0_unigene149881 SustainPine v3.0 345
• AutoFact: 40S ribosomal protein S2 n=1 Tax=Picea abies RepID=Q9AVU0_PICAB 8.0e-06
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 5.523e-08
Putative C-terminus
sp_v3.0_unigene150224 SustainPine v3.0 378
• AutoFact: [J] COG0098 Ribosomal protein S5 3.0e-20
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.554e-15
C-terminus
sp_v3.0_unigene150258 SustainPine v3.0 312
• AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 30S ribosomal protein S5, chloroplastic 1.586e-31
Putative C-terminus
sp_v3.0_unigene150543 SustainPine v3.0 298
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Cyanidium caldarium RepID=Q9M634_CYACA 3.0e-29
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Internal
sp_v3.0_unigene150819 SustainPine v3.0 425
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Chlorella variabilis RepID=E1ZQQ5_9CHLO 6.0e-17
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene150863 SustainPine v3.0 216
• AutoFact: PREDICTED: 40S ribosomal protein S2-like n=1 Tax=Meleagris gallopavo RepID=UPI0002036414 4.0e-20
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 4.354e-15
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain