Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Clathrin/coatomer adaptor, adaptin-like, N-terminal

Term: IPR002553  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2345 SustainPine v3.0 3948
• AutoFact: AP-2 complex subunit alpha, putative; K11824 AP-2 complex subunit alpha 0.0
• FL-Next: sp=AP-2 complex subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome chr6 scaffold_25, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene2371 SustainPine v3.0 3309
• AutoFact: beta-adaptin-like protein B [Arabidopsis thaliana] sp|Q9SUS3.1|APBLB_ARATH RecName: Full=Beta-adaptin-like protein B; Short=At-bB-Ad; Short=At-betaB-Ad; AltName: Full=AP complex subunit beta-B; AltName: Full=Adaptor protein complex AP subunit beta-B; AltN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2656 SustainPine v3.0 3736
• AutoFact: AP-1 complex subunit gamma-2, putative n=1 Tax=Ricinus communis RepID=B9S4M0_RICCO 0.0
• FL-Next: sp=AP-1 complex subunit gamma-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative gamma-adaptin 1 1.262e-08
Complete
sp_v3.0_unigene2725 SustainPine v3.0 3491
• AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 0.0
• FL-Next: sp=Coatomer subunit gamma-2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Chromosome chr3 scaffold_8, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene6594 SustainPine v3.0 3011
• AutoFact: beta-adaptin-like protein A [Arabidopsis thaliana] sp|Q9LDK9.1|APBLA_ARATH RecName: Full=Beta-adaptin-like protein A; Short=At-bA-Ad; Short=At-betaA-Ad; AltName: Full=AP complex subunit beta-A; AltName: Full=Adaptor protein complex AP subunit beta-A; AltN 0.0
• FL-Next: sp=Beta-adaptin-like protein A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene7058 SustainPine v3.0 2968
• AutoFact: AP-4 complex subunit epsilon [Arabidopsis thaliana] sp|Q8L7A9.1|AP4E_ARATH RecName: Full=AP-4 complex subunit epsilon; AltName: Full=AP-4 adapter complex subunit epsilon; AltName: Full=Adapter-related protein complex 4 subunit epsilon; AltName: Full=Epsil 0.0
• FL-Next: sp=AP-4 complex subunit epsilon; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene9029 SustainPine v3.0 2479
• AutoFact: AP-3 complex subunit delta [Arabidopsis thaliana] ref|NP_849785.1| AP-3 complex subunit delta [Arabidopsis thaliana] ref|NP_001031156.1| AP-3 complex subunit delta [Arabidopsis thaliana] sp|Q9C744.1|AP3D_ARATH RecName: Full=AP-3 complex subunit delta; Alt 0.0
• FL-Next: sp=AP-3 complex subunit delta; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene10078 SustainPine v3.0 1016
• AutoFact: Coatomer subunit beta, putative n=1 Tax=Ricinus communis RepID=B9RNM4_RICCO 0.0
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Coatomer subunit beta 1.39e-12
N-terminus
sp_v3.0_unigene14166 SustainPine v3.0 1295
• AutoFact: AP-1 complex subunit gamma-2, putative n=1 Tax=Ricinus communis RepID=B9S1S1_RICCO 0.0
• FL-Next: sp=AP-4 complex subunit epsilon; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene37578 SustainPine v3.0 1519
• AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Coatomer subunit beta 1.39e-12
Putative N-terminus
sp_v3.0_unigene37790 SustainPine v3.0 1008
• AutoFact: Coatomer subunit beta, putative n=1 Tax=Ricinus communis RepID=B9RNM4_RICCO 0.0
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Coatomer subunit beta 6.528e-13
C-terminus
sp_v3.0_unigene44722 SustainPine v3.0 357
• AutoFact: AP-3 complex subunit delta [Arabidopsis thaliana] ref|NP_849785.1| AP-3 complex subunit delta [Arabidopsis thaliana] ref|NP_001031156.1| AP-3 complex subunit delta [Arabidopsis thaliana] sp|Q9C744.1|AP3D_ARATH RecName: Full=AP-3 complex subunit delta; Alt 9.94922e-44
• FL-Next: sp=AP-3 complex subunit delta; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene48269 SustainPine v3.0 275
• AutoFact: putative AP3-complex beta-3A adaptin subunit [Arabidopsis thaliana] 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene52096 SustainPine v3.0 338
• AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 3.0e-19
• FL-Next: sp=Coatomer subunit gamma; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Coatomer subunit gamma 1.328e-08
Internal
sp_v3.0_unigene56109 SustainPine v3.0 379
• AutoFact: alpha-adaptin C homolog [Arabidopsis thaliana] 5.0e-35
• FL-Next: Isoform 3 of AP-2 complex subunit alpha-1 OS=Arabidopsis thaliana GN=ALPHA-ADR 0.0
• Sma3: Alpha-adaptin 3.157e-08
Internal
sp_v3.0_unigene60895 SustainPine v3.0 173
• AutoFact: putative coatmer beta subunit [Fragaria x ananassa] 3.0e-15
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Coatomer subunit beta-2 6.195e-09
Internal
sp_v3.0_unigene61765 SustainPine v3.0 192
• AutoFact: beta-adaptin-like protein B [Arabidopsis thaliana] sp|Q9SUS3.1|APBLB_ARATH RecName: Full=Beta-adaptin-like protein B; Short=At-bB-Ad; Short=At-betaB-Ad; AltName: Full=AP complex subunit beta-B; AltName: Full=Adaptor protein complex AP subunit beta-B; AltN 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62878 SustainPine v3.0 243
• AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 1.0e-17
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Coatomer subunit beta 1.042e-12
Internal
sp_v3.0_unigene64812 SustainPine v3.0 130
• AutoFact: Beta-COP-like protein [Arabidopsis thaliana] emb|CAB79867.1| Beta-COP-like protein [Arabidopsis thaliana] 1.0e-08
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Coatomer subunit beta-2 6.743e-09
Internal
sp_v3.0_unigene64819 SustainPine v3.0 208
• AutoFact: AP-3 complex subunit delta [Arabidopsis thaliana] ref|NP_849785.1| AP-3 complex subunit delta [Arabidopsis thaliana] ref|NP_001031156.1| AP-3 complex subunit delta [Arabidopsis thaliana] sp|Q9C744.1|AP3D_ARATH RecName: Full=AP-3 complex subunit delta; Alt 4.0e-12
• FL-Next: sp=AP-3 complex subunit delta; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain