Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene48692 SustainPine v3.0 250
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene48920 SustainPine v3.0 153
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 1.0e-12
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 6.51e-08
Internal
sp_v3.0_unigene49083 SustainPine v3.0 1822
AutoFact: pectate lyase [Prunus persica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Complete
sp_v3.0_unigene49164 SustainPine v3.0 295
AutoFact: Putative pectin methylesterase (Fragment) n=1 Tax=Picea abies RepID=A5X523_PICAB 9.0e-23
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene49677 SustainPine v3.0 972
AutoFact: Pectate lyase n=2 Tax=Carica papaya RepID=Q0Q2I1_CARPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Putative C-terminus
sp_v3.0_unigene49732 SustainPine v3.0 679
AutoFact: pfam01535, PPR, PPR repeat 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.54143e-44
Internal
sp_v3.0_unigene50214 SustainPine v3.0 840
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene50935 SustainPine v3.0 344
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 1.0e-37
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene51540 SustainPine v3.0 585
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAL16105.1|AF428273_1 AT4g20040/F18F4_140 [Arabidopsis thaliana] gb|AAM91456.1| AT4g20040/F18F4_140 [Arabidopsis thaliana] gb|AEE84265.1| Pectin lyase-like protein [Arabidopsis thaliana] 4.0e-24
FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene51858 SustainPine v3.0 340
AutoFact: Unassigned protein 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene52287 SustainPine v3.0 457
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RI03_RICCO 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene52514 SustainPine v3.0 370
AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S11 8.377e-36
N-terminus
sp_v3.0_unigene52642 SustainPine v3.0 182
AutoFact: Unassigned protein 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene52645 SustainPine v3.0 218
AutoFact: Unassigned protein
FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene52653 SustainPine v3.0 424
AutoFact: PREDICTED: ripening-related protein-like [Vitis vinifera] emb|CAB85625.1| putative ripening-related protein [Vitis vinifera] emb|CAN79279.1| hypothetical protein VITISV_005237 [Vitis vinifera] emb|CBI24569.3| unnamed protein product [Vitis vinifera] 5.0e-06
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene52735 SustainPine v3.0 137
AutoFact: Pectinesterase n=1 Tax=Sesbania rostrata RepID=Q8RVX1_SESRO 2.0e-07
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene52806 SustainPine v3.0 425
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SS70_RICCO 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 4.501e-24
Internal
sp_v3.0_unigene53026 SustainPine v3.0 470
AutoFact: Putative gag-pol polyprotein n=1 Tax=Fragaria x ananassa RepID=C6GFP7_FRAAN 6.0e-35
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.153e-16
Internal
sp_v3.0_unigene53232 SustainPine v3.0 274
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PST8_PICSI 2.0e-21
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 3.745e-17
Internal
sp_v3.0_unigene53334 SustainPine v3.0 446
AutoFact: putative polygalacturonase / pectinase [Arabidopsis thaliana] emb|CAA66811.1| polygalacturonase-like protein [Arabidopsis thaliana] dbj|BAB01843.1| polygalacturonase [Arabidopsis thaliana] dbj|BAC42276.1| putative polygalacturonase [Arabidopsis thaliana] 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain