Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene156083 SustainPine v3.0 263
• AutoFact: 40S ribosomal protein S11, putative n=5 Tax=Eukaryota RepID=C9ZIN6_TRYB9 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 4.361e-32
C-terminus
sp_v3.0_unigene156623 SustainPine v3.0 350
• AutoFact: KLTH0C07810p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DEB4_LACTC 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.286e-35
C-terminus
sp_v3.0_unigene157536 SustainPine v3.0 192
• AutoFact: Polygalacturonase n=1 Tax=Persea americana RepID=PGLR_PERAE 2.0e-10
• FL-Next: tr=Allergen Cry j 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Internal
sp_v3.0_unigene157564 SustainPine v3.0 386
• AutoFact: Pectinesterase n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7ZFZ7_NECH7 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene157663 SustainPine v3.0 359
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.433e-30
Internal
sp_v3.0_unigene158461 SustainPine v3.0 292
• AutoFact: polygalacturonase PG1-like [Oryza sativa Japonica Group] dbj|BAD68939.1| polygalacturonase PG1-like [Oryza sativa Japonica Group] 7.0e-35
• FL-Next: sp=Polygalacturonase; Juniperus ashei (Ozark white cedar). 0.0
• Sma3: Polygalacturonase 8.815e-16
Internal
sp_v3.0_unigene159299 SustainPine v3.0 370
• AutoFact: Pectinesterase n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7ZFZ7_NECH7 5.0e-37
• FL-Next: sp=Pectinesterase; Vitis riparia (Frost grape) (Vitis vulpina). 0.0
Putative N-terminus
sp_v3.0_unigene159458 SustainPine v3.0 479
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 9.0e-32
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene159976 SustainPine v3.0 448
• AutoFact: LRR receptor-like serine/threonine-protein kinase EFR [Arabidopsis thaliana] sp|C0LGT6.1|EFR_ARATH RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR; AltName: Full=Elongation factor Tu receptor; Short=EF-Tu receptor; Flags: Precursor gb| 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine Rich Repeat, putative 1.699e-18
Putative Complete
sp_v3.0_unigene160804 SustainPine v3.0 337
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 5.0e-08
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: cDNA clone:001-204-C08, full insert sequence 8.285e-06
C-terminus
sp_v3.0_unigene161370 SustainPine v3.0 208
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 1.0e-26
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene161497 SustainPine v3.0 247
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 2.0e-35
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Transposon protein, putative, unclassified 7.069e-08
Internal
sp_v3.0_unigene163794 SustainPine v3.0 308
• AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9TA63_RICCO 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polygalacturonase 3.283e-06
Internal
sp_v3.0_unigene163963 SustainPine v3.0 296
• AutoFact: Glycoside hydrolase, family 28 n=3 Tax=Andropogoneae RepID=B6TXJ8_MAIZE 7.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polygalacturonase 1.487e-19
Internal
sp_v3.0_unigene164168 SustainPine v3.0 412
• AutoFact: Pectate lyase, putative n=1 Tax=Ricinus communis RepID=B9RWM7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene164222 SustainPine v3.0 341
• AutoFact: pectate lyase [Prunus persica] 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 3.8e-40
Internal
sp_v3.0_unigene164743 SustainPine v3.0 134
• AutoFact: 40S ribosomal protein S11 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NHB6_PHYIT 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 6.676e-32
Internal
sp_v3.0_unigene165185 SustainPine v3.0 103
• AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 5.0e-07
• FL-Next: sp=Probable pectinesterase 53; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene165193 SustainPine v3.0 185
• AutoFact: Pectinesterase n=1 Tax=Taiwania cryptomerioides RepID=B0L3S3_9CONI 8.0e-20
• FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
• Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene165347 SustainPine v3.0 434
• AutoFact: Pectinesterase n=1 Tax=Phaeosphaeria nodorum SN15 RepID=Q0U6H2_PHANO 2.00386e-43
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain