Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene75922 SustainPine v3.0 501
• AutoFact: Probable pectate lyase 22 n=2 Tax=Arabidopsis RepID=PLY22_ARATH 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
N-terminus
sp_v3.0_unigene75939 SustainPine v3.0 352
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T1H2_RICCO 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 4.56e-15
Internal
sp_v3.0_unigene76134 SustainPine v3.0 282
• AutoFact: Pectinesterase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=C4N552_MUSAC 5.0e-37
• FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
• Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene76195 SustainPine v3.0 344
• AutoFact: putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] dbj|BAD33650.1| putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] gb|EAZ44777.1| hypothetical protein OsJ_29408 [Oryza sativa Japonica Gr 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine-threonine protein kinase, plant-type, putative 9.412e-18
Internal
sp_v3.0_unigene76397 SustainPine v3.0 264
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 1.0e-30
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 8.061e-06
Internal
sp_v3.0_unigene76541 SustainPine v3.0 199
• AutoFact: Pectinesterase n=2 Tax=Solanum tuberosum RepID=E8ZG61_SOLTU 6.0e-27
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene76743 SustainPine v3.0 238
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NVV0_PICSI 2.0e-15
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 1.09399e-40
C-terminus
sp_v3.0_unigene76754 SustainPine v3.0 254
• AutoFact: Pectate lyase 1 n=2 Tax=Musa acuminata RepID=Q9SDW4_MUSAC 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 4.577e-22
Internal
sp_v3.0_unigene76995 SustainPine v3.0 252
• AutoFact: Pectate lyase, putative n=1 Tax=Ricinus communis RepID=B9RWM7_RICCO 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene77284 SustainPine v3.0 470
• AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9SP63_RICCO 5.0e-30
• FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
• Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene77349 SustainPine v3.0 362
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 8.978e-10
Internal
sp_v3.0_unigene77454 SustainPine v3.0 97
• AutoFact: Pectinesterase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RRD1_PHYPA 6.0e-09
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 9.251e-19
Internal
sp_v3.0_unigene77776 SustainPine v3.0 237
• AutoFact: Pectate lyase n=7 Tax=Rosodae RepID=E3VSV6_9ROSA 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene77840 SustainPine v3.0 349
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Transposon protein, putative, unclassified 2.994e-09
Putative C-terminus
sp_v3.0_unigene78020 SustainPine v3.0 281
• AutoFact: Pectinesterase n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MIG6_TALSN 3.0e-31
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene78067 SustainPine v3.0 344
• AutoFact: Pectinesterase-3, putative n=1 Tax=Ricinus communis RepID=B9RH55_RICCO 3.0e-38
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene78466 SustainPine v3.0 134
• AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene78907 SustainPine v3.0 219
• AutoFact: Pectinesterase n=2 Tax=Malpighiales RepID=B9H3W4_POPTR 2.0e-18
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 3.709e-07
Internal
sp_v3.0_unigene78929 SustainPine v3.0 387
• AutoFact: pectate lyase [Salix gilgiana] 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene79109 SustainPine v3.0 409
• AutoFact: putative polygalacturonase [Arabidopsis thaliana] sp|Q94AJ5.1|PGLR5_ARATH RecName: Full=Probable polygalacturonase At1g80170; Short=PG; AltName: Full=Pectinase At1g80170; Flags: Precursor gb|AAK76676.1| putative polygalacturonase [Arabidopsis thaliana] gb 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 6.596e-14
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain