Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene66404 SustainPine v3.0 261
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene66644 SustainPine v3.0 374
AutoFact: Pectate lyase n=2 Tax=Carica papaya RepID=Q0Q2I1_CARPA 8.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 2.361e-19
Internal
sp_v3.0_unigene66746 SustainPine v3.0 223
AutoFact: Putative gag-pol polyprotein n=1 Tax=Citrus sinensis RepID=Q18L98_CITSI 4.0e-14
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.038e-10
Internal
sp_v3.0_unigene67364 SustainPine v3.0 419
AutoFact: Leucine Rich Repeat family protein [Oryza sativa Japonica Group] 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine Rich Repeat, putative 5.349e-11
Putative N-terminus
sp_v3.0_unigene68584 SustainPine v3.0 142
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=D5AB84_PICSI 2.0e-14
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 9.994e-08
Internal
sp_v3.0_unigene68634 SustainPine v3.0 270
AutoFact: ribosome-associated GTPase [Cyanothece sp. CCY0110] gb|EAZ93119.1| ribosome-associated GTPase [Cyanothece sp. CCY0110] 7.0e-08
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Putative C-terminus
sp_v3.0_unigene68677 SustainPine v3.0 235
AutoFact: Pectate lyase (Fragment) n=3 Tax=Musa acuminata RepID=Q8RVQ3_MUSAC 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 7.091e-39
Internal
sp_v3.0_unigene68926 SustainPine v3.0 157
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 2.0e-13
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene69670 SustainPine v3.0 143
AutoFact: Putative pectate lyase 2 n=3 Tax=Arabidopsis RepID=PLY2_ARATH 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 5.8294e-43
Internal
sp_v3.0_unigene69681 SustainPine v3.0 212
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene69712 SustainPine v3.0 193
AutoFact: Unassigned protein
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene70400 SustainPine v3.0 236
AutoFact: Pectinesterase (Fragment) n=2 Tax=Picea RepID=A5X524_PICAB 5.0e-26
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 3.123e-12
C-terminus
sp_v3.0_unigene70838 SustainPine v3.0 195
AutoFact: Pectate lyase, putative n=1 Tax=Ricinus communis RepID=B9RWM7_RICCO 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 5.25001e-40
Internal
sp_v3.0_unigene71034 SustainPine v3.0 154
AutoFact: polygalacturonase [Cucumis sativus] 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pollen allergen 4.604e-09
Internal
sp_v3.0_unigene71168 SustainPine v3.0 311
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RCG6_RICCO 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase, putative 1.658e-09
Internal
sp_v3.0_unigene71191 SustainPine v3.0 216
AutoFact: Pectinesterase n=1 Tax=Oncidium Gower Ramsey RepID=B6V9S5_ONCHC 3.0e-09
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 1.185e-25
Putative C-terminus
sp_v3.0_unigene71584 SustainPine v3.0 358
AutoFact: Endo-polygalacturonase-like protein n=2 Tax=Arabidopsis RepID=Q9SMT3_ARATH 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene71766 SustainPine v3.0 158
AutoFact: Probable pectinesterase/pectinesterase inhibitor 7 n=1 Tax=Arabidopsis thaliana RepID=PME7_ARATH 3.0e-13
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Sma3: Pectinesterase 2.476e-39
Internal
sp_v3.0_unigene71822 SustainPine v3.0 343
AutoFact: Pectinesterase n=1 Tax=Sorghum bicolor RepID=C5Z1D0_SORBI 5.0e-23
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 2.886e-16
C-terminus
sp_v3.0_unigene71845 SustainPine v3.0 352
AutoFact: Putative Receptor-like protein kinase [Oryza sativa Japonica Group] gb|AAP53414.1| Leucine Rich Repeat family protein, expressed [Oryza sativa Japonica Group] gb|EAZ15874.1| hypothetical protein OsJ_31295 [Oryza sativa Japonica Group] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine Rich Repeat family protein, expressed 1.119e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain