Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Parallel beta-helix repeat

Term: IPR006626  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene61723 SustainPine v3.0 311
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61913 SustainPine v3.0 362
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial; Flags: Precursor dbj|BAB01925.1| selenium-binding protein-like [Arabido 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene61982 SustainPine v3.0 305
• AutoFact: RVT_2 domain containing protein 5.0e-06
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.828e-17
Internal
sp_v3.0_unigene61996 SustainPine v3.0 223
• AutoFact: Glycoside hydrolase, family 28 [Medicago truncatula] 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 9.59e-37
Internal
sp_v3.0_unigene62001 SustainPine v3.0 318
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170 emb|CAB16758.1| putative protein [Arabidopsis thaliana] emb|CAB80383.1| putative protein [Arabid 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62273 SustainPine v3.0 268
• AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AAM14020.1| unknown protein [Arabidopsis thaliana] gb|AAM91751.1| unknown protein [Arabidopsis thaliana] gb|AED95784.1| glycoside hydrolase fami 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase, putative 1.501e-06
Putative N-terminus
sp_v3.0_unigene62432 SustainPine v3.0 257
• AutoFact: Pectate lyase n=7 Tax=Rosodae RepID=E3VSV6_9ROSA 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene64212 SustainPine v3.0 209
• AutoFact: Quartet 3 (Fragment) n=1 Tax=Picea abies RepID=B2KZH0_PICAB 8.0e-14
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene64319 SustainPine v3.0 302
• AutoFact: pectate lyase precursor [Glycine max] 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene65149 SustainPine v3.0 190
• AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q851Y3_ORYSJ 9.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.825e-11
Putative N-terminus
sp_v3.0_unigene65388 SustainPine v3.0 255
• AutoFact: Unassigned protein 2.0e-33
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Transposon protein, putative, unclassified 2.126e-07
Internal
sp_v3.0_unigene66049 SustainPine v3.0 396
• AutoFact: Probable pectate lyase 5 n=2 Tax=Arabidopsis RepID=PLY5_ARATH 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 1.217e-26
N-terminus
sp_v3.0_unigene66644 SustainPine v3.0 374
• AutoFact: Pectate lyase n=2 Tax=Carica papaya RepID=Q0Q2I1_CARPA 8.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 2.361e-19
Internal
sp_v3.0_unigene66746 SustainPine v3.0 223
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Citrus sinensis RepID=Q18L98_CITSI 4.0e-14
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.038e-10
Internal
sp_v3.0_unigene67716 SustainPine v3.0 230
• AutoFact: Glucose-1-phosphate adenylyltransferase n=3 Tax=Benincaseae RepID=E5GCI5_CUCME 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glucose-1-phosphate adenylyltransferase 0.0
Internal
sp_v3.0_unigene68677 SustainPine v3.0 235
• AutoFact: Pectate lyase (Fragment) n=3 Tax=Musa acuminata RepID=Q8RVQ3_MUSAC 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 7.091e-39
Internal
sp_v3.0_unigene68775 SustainPine v3.0 214
• AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6T4_PHYPA 5.0e-24
• FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glucose-1-phosphate adenylyltransferase 0.0
Internal
sp_v3.0_unigene69670 SustainPine v3.0 143
• AutoFact: Putative pectate lyase 2 n=3 Tax=Arabidopsis RepID=PLY2_ARATH 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 5.8294e-43
Internal
sp_v3.0_unigene69681 SustainPine v3.0 212
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene70838 SustainPine v3.0 195
• AutoFact: Pectate lyase, putative n=1 Tax=Ricinus communis RepID=B9RWM7_RICCO 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 5.25001e-40
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain