Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Parallel beta-helix repeat

Term: IPR006626  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene18861 SustainPine v3.0 625
AutoFact: Pectate lyase [Prunus mume] 8.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 2.621e-39
N-terminus
sp_v3.0_unigene19101 SustainPine v3.0 299
AutoFact: polygalacturonase, putative [Arabidopsis thaliana] 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase, putative 3.373e-20
Putative N-terminus
sp_v3.0_unigene19199 SustainPine v3.0 320
AutoFact: Pectase lyase n=2 Tax=Prunus persica RepID=D4NXR8_PRUPE 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene20123 SustainPine v3.0 420
AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 3.0e-31
FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene20162 SustainPine v3.0 1980
AutoFact: proline-rich protein [Solanum tuberosum] 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Proline-rich protein 4.151e-11
Putative Complete
sp_v3.0_unigene20553 SustainPine v3.0 436
AutoFact: FAP multi-domain protein 1.0e-15
Sma3: Glycine-rich protein 7.373e-14
coding
sp_v3.0_unigene21513 SustainPine v3.0 603
AutoFact: Extensin_2 multi-domain protein 4.0e-23
Sma3: Extensin 0.0
coding
sp_v3.0_unigene21810 SustainPine v3.0 871
AutoFact: polygalacturonase [Citrus sinensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 0.0
C-terminus
sp_v3.0_unigene21972 SustainPine v3.0 390
AutoFact: Putative pectate lyase 14 n=4 Tax=Arabidopsis RepID=PLY14_ARATH 5.99756e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene22000 SustainPine v3.0 790
AutoFact: pectate lyase [Prunus persica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene24324 SustainPine v3.0 412
AutoFact: Drf_FH1 multi-domain protein 3.0e-15
Sma3: Glycine-rich protein 5.733e-12
coding
sp_v3.0_unigene24789 SustainPine v3.0 1267
AutoFact: Pectate lyase n=4 Tax=Spiraeoideae RepID=Q6U7H9_MALDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene27364 SustainPine v3.0 424
AutoFact: Drf_FH1 multi-domain protein 7.0e-36
Sma3: Extensin-like protein 1.735e-19
coding
sp_v3.0_unigene28046 SustainPine v3.0 573
AutoFact: putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] 8.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene28133 SustainPine v3.0 1504
AutoFact: pectate lyase [Prunus persica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene29500 SustainPine v3.0 859
AutoFact: Fibrinogen and fibronectin n=1 Tax=Culex quinquefasciatus RepID=B0WKJ3_CULQU 8.0e-09
Sma3: Glycine-rich protein 2.897e-16
coding
sp_v3.0_unigene30102 SustainPine v3.0 950
AutoFact: Drf_FH1 multi-domain protein 1.0e-21
Sma3: Glycine-rich protein 4.83e-14
coding
sp_v3.0_unigene30517 SustainPine v3.0 733
AutoFact: Drf_FH1 multi-domain protein 2.0e-20
Sma3: Glycine-rich protein 2.316e-14
coding
sp_v3.0_unigene31910 SustainPine v3.0 442
AutoFact: Extensin_2 multi-domain protein 3.0e-21
Sma3: Extensin 0.0
coding
sp_v3.0_unigene32448 SustainPine v3.0 750
AutoFact: FAP multi-domain protein 9.0e-12
putative_coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain